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SCN18_25_1_16_R1_B_scaffold_928_5

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 5246..6022

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein, AttJ n=1 Tax=uncultured bacterium RepID=K2A0X6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 257.0
  • Bit_score: 210
  • Evalue 1.20e-51
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AKI03443.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.3
  • Coverage: 259.0
  • Bit_score: 225
  • Evalue 5.10e-56
iclR; transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 246.0
  • Bit_score: 162
  • Evalue 1.40e-37

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Taxonomy

CN-SCN_Devosia_27x → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGGATCAAGACAAGTCTTTGCAGAAGCTGGTCCCGGCGGTCGAGCGGGCTGCGGGTATTCTGGACCTGATCAGCGCCTCAAAGCGGTTTCTGACAGTTTCCGAACTTTCGCGGGAAACCAATTTACCTAAAAGCACTGTCCATAGCCTTTGCGTGACCATGACTCAGCTTGGGCTGTTGATAAGGCGTTCGGATCAGACCTACGTGCTTGGCCCGCATCTGCTTCGATGGTCGAACGGTTTCGATCGCCAGACCGATGTCGCCACGGAATTTGCGCTGCTGTGCGACGACGCACCGCTTCTGGAGCATGCTACGGCGTCGCTTTCGGTGCCGGAAGAAGCCGATATGGTGTTCATCGCCGCCAGGCAGACGCTCGGCGGAAACCGTTTCGCGGCCCGGCCGGGAATGCGCTTGCCGGCTGCATTCGTCGCGGCAGGCAAGGCGGTTCTGTCGCTGTCCGCCGACTTCGATGTCCGGCGCTCCTACGCCGACGGCTTTCCGGCGCCGCTGACCGAAAATTCCGTGTCCAGCCTGGATGAGCTTCTCAAGGAGCTCGGCAGGGCGCGAGAGACCGGCGTCGTCAACGATATCGGCCAATGTATCGAAGGCGTGACCAATATCAGCGCGCCGGTGCTCAACGCGCTCAACAAGCCGCTGGCGGCCATCATGCTTAGCGCGCCGAGCGAACTGGTCGAGGGGCCGCAGATGGAGGAGCTTTCCCATCTGGTAATCTCCCTCGCCAACAGGCTGTCGCACCGGATGGGCGCAGCTCTCTAA
PROTEIN sequence
Length: 259
MDQDKSLQKLVPAVERAAGILDLISASKRFLTVSELSRETNLPKSTVHSLCVTMTQLGLLIRRSDQTYVLGPHLLRWSNGFDRQTDVATEFALLCDDAPLLEHATASLSVPEEADMVFIAARQTLGGNRFAARPGMRLPAAFVAAGKAVLSLSADFDVRRSYADGFPAPLTENSVSSLDELLKELGRARETGVVNDIGQCIEGVTNISAPVLNALNKPLAAIMLSAPSELVEGPQMEELSHLVISLANRLSHRMGAAL*