ggKbase home page

SCN18_25_1_16_R1_B_scaffold_1171_9

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(2930..3763)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L2 n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAE1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 277.0
  • Bit_score: 538
  • Evalue 2.10e-150
rplB; 50S ribosomal protein L2 similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 277.0
  • Bit_score: 538
  • Evalue 1.00e-150
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 277.0
  • Bit_score: 538
  • Evalue 2.90e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGGCACTGAAAAAATTCAATCCGACGACACCCGGCCAGCGTCAGCTGGTGATGGTCGATCGTTCGGCCCTGTATAAGGGCAAGCCGGTCAAGGCGCTGACCGAGGGCAAGTCCTCGGCTGGCGGCCGCAACAACACCGGTCGCATCACCGTGCGTTTCCGTGGCGGCGGTCACAAGCAGACCTATCGCCTGGTCGACTTCAAGCGCACCAAGGTTGATGTCGCCGCAACCGTGGAACGGCTCGAATACGATCCGAACCGCACCGCCTTCATCGCGCTGATCAAGTATGCCGATGGCGAGCAGGCTTACATCCTCGCGCCGCAGCGTCTGGCTGTCGGTGACCAGGTGATCGCCGGCAACTACGTCGACGTGAAGCCGGGCAACGTCATGCCGCTCGGCAACATGCCGGTCGGCACCATCGTCCACAACATCGAGCTGAAGATCGGCAAGGGCGGGCAGATCGCACGTTCGGCGGGCACCTATGCCCAGATCGTCGGCCGCGATCATGACTACGTCATCCTGCGTCTGAACTCGGGCGAGCAACGTCTGGTTCACGGCCGCTGCCGTGGTTCGATCGGTGCTGTGTCCAATCCGGACCACATGAACACCTCGATCGGCAAGGCTGGCCGCACCCGCTGGATGGGCCGTCGCCCGCACAACCGCGGCGTCGTCATGAACCCGATCGACCATCCGCACGGCGGTGGTGAAGGCCGCACCTCGGGCGGTCGTCACCCGGTCACCCCGTGGGGCAAGCCGACCAAAGGCAAGAAGACGCGGTCGAACAAGTCGACCAACAAGTTCATTCTCATCAGCCGCCACAAGCGGAAGAAGTAA
PROTEIN sequence
Length: 278
MALKKFNPTTPGQRQLVMVDRSALYKGKPVKALTEGKSSAGGRNNTGRITVRFRGGGHKQTYRLVDFKRTKVDVAATVERLEYDPNRTAFIALIKYADGEQAYILAPQRLAVGDQVIAGNYVDVKPGNVMPLGNMPVGTIVHNIELKIGKGGQIARSAGTYAQIVGRDHDYVILRLNSGEQRLVHGRCRGSIGAVSNPDHMNTSIGKAGRTRWMGRRPHNRGVVMNPIDHPHGGGEGRTSGGRHPVTPWGKPTKGKKTRSNKSTNKFILISRHKRKK*