ggKbase home page

SCN18_25_1_16_R1_B_scaffold_631_4

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 5414..6220

Top 3 Functional Annotations

Value Algorithm Source
Regulatory proteins, IclR n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q137Z7_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 262.0
  • Bit_score: 347
  • Evalue 1.10e-92
regulatory protein IclR similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 262.0
  • Bit_score: 347
  • Evalue 3.20e-93
Regulatory proteins, IclR {ECO:0000313|EMBL:ABE39592.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 262.0
  • Bit_score: 347
  • Evalue 1.60e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGACGACAGACACCACGACGACAGACGACGCATCGCCGGGGCCGCTCGGCCGCTACATGGACGTGCTCGAACTGGTGGCCGCTTTTCCCGGTGCGCTGACGCTCGGCGACGTCTCGTCGATGCTGGCGCTGCCGAAGACCACCGCGCACCGGCTGCTGAAAGGTCTGGTGAAAGCCGGCCTCGCCCGCGAAGCCGTCGGCGGCCGCGCCTACGATCTGGGCGAACGCCTGACGCGGCTGGTCCATGCCACCGTCGACGACGACTGGCTGGCGACGCTGACCAGTCCGCATCTGCGGCAGATCATCGAAGACTGGGGCGAGACCTGTTACCTGACGCGGCTCGCCGGCGGGCGCGTCGTGGTCGCGGTATCGCAATCGCCCGACGTGCGCTGGCGCGGCTACGTGCAGCCCGGCATCGAAATGCCGGTCAACGCGGCGGCGTCGGCGAAAGCCATTATGGCTTACCAAGACCACGCGACCTTGGCGCAGGCATTGGCGCAACCGCTGCCGATCGTCACCGCCAACACCCGCAACGATACGGCGTGGGTGGAGTCAGAATTGGAAGCGGTGCGCGAACGCGGCTACGCCACCTGCATCGGCGAGATCGACGAGGGCCTTGCGGCGATCGCCGTTCCGGTCACCTTGCCGGACGGCATGGTGCTTCACGCGCTGGCGATGACGGGGCCGTTGCAGCGGATCATGAACGAACGGCTGCCGGAGCGCATCGACGCGCTGAATGCGACCGGCGCGACGTTGGCAAAGGCGCTGGCGCTCGGCGCGAAAATCCGCGAGCGCGGGGCGAATTAA
PROTEIN sequence
Length: 269
MTTDTTTTDDASPGPLGRYMDVLELVAAFPGALTLGDVSSMLALPKTTAHRLLKGLVKAGLAREAVGGRAYDLGERLTRLVHATVDDDWLATLTSPHLRQIIEDWGETCYLTRLAGGRVVVAVSQSPDVRWRGYVQPGIEMPVNAAASAKAIMAYQDHATLAQALAQPLPIVTANTRNDTAWVESELEAVRERGYATCIGEIDEGLAAIAVPVTLPDGMVLHALAMTGPLQRIMNERLPERIDALNATGATLAKALALGAKIRERGAN*