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SCN18_25_1_16_R1_B_scaffold_631_10

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(11379..12785)

Top 3 Functional Annotations

Value Algorithm Source
2-methylcitrate dehydratase n=3 Tax=Amycolatopsis mediterranei RepID=D8HNN0_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 453.0
  • Bit_score: 315
  • Evalue 6.40e-83
prpD; 2-methylcitrate dehydratase similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 453.0
  • Bit_score: 315
  • Evalue 1.80e-83
2-methylcitrate dehydratase {ECO:0000313|EMBL:AEK42401.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 453.0
  • Bit_score: 315
  • Evalue 9.00e-83

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGGCGGGCGCGGCGCACCAGCGGACATTCGCGCGCGGCGCGGGGCCGACGGCGGCGCTGCTCGATTTCGCGCATCGCCTGCGGTGGCGCGATCTCGACGCCGAGGTGCGGCATGAAGCCAAGCGGCATCTGCTCGATACGCTCGGCGTGATGATCGCCGGCGGCGCCGGCGACGTCGCGTCGAAAGCGGATGCGGTGCTGACGACGATCCGACCCGCAGGTGGCGCGGTGCCGGTGCCGGGTCGTGCGCGGCGGGTCGATCGGTTAGACGCCGCATGGCTCGGCGGCACCGGCGCCCATGGCATCGAACTCGACGACGGCTATCGCGAAGGCTCGGTGCATCCCGGCGTCGCCGTGGTGCCCGCTCTGCTATCGGCCGCTTATGGCGACAAGGTTTCCGGCGAGCGGCTGCTGGAAGCGATGGTCGCCGGCTACGAAGCCGTCACCGCCATCGCGCGCGCCGGCCATCCGATGGCGCGGCAGCGCGGCTTCCATCCCACCGGGATCGTCGGTTCGCTCGGCGCGGCGCTCGCGTCGGCACGCTTGCTCGGTCTTCCGCGCGCGCAAACTGCGAATGCGCTCGGCCTTGCTGCCAGTGCATCCGCGGGATTGTTCGCGTTTCTTGCCGGCGGCGGCGACGTCAAGCGGCTGCACGCGGGTCATGCGGCGCGCGAAGGCCTGACCGCAGCGCTTTTGTCGCGCGGCGGCGTCGAGGGACCGCCCGACGTGCTCGAGGGGCCGGACGGATTCTTCCAGGCATTTCCCGGCGACGCGGATCGCGTCGCGGCGAACTTCAAGTTGCCGCCCGATGCGCCGTTCGGCGTGGTCGATTGCTACTTCAAGCCGTATGCCTGTTGCCGCCACTTGCAGCCGGCGGTCGAGGCGATGATGACGCTGTGCCGCGATCACGGCCTTGTCGAACAGGATATCCAGCGCATCGACGTCGAGACCTACGCGATTGCAACATCGCACGCCGAGACCCGCTGGGGCGACTTCGCCAGCGCGCAATTGAGCTTCCCGTTTATCATGGCGCTCGGTCTGCGTTACGGCCGCATCGATCTGAAGCATTTCGAGGACGATATCCGCGCCGATGCCGGGCTCGCCGAGGCGTGCAAGCTGGTCCATGTCCGCACTGCCCCCGATCTCGACGCGATGTATCCGTCGCGGCGGCCGGCGCGCGTGAAGCTCATCACCACCAAGGGCGAGTTTTCCCGCGAGGCGTTCGAGGCCATCGGCTCGCGCGACCTGCCGCTCGACGATGACGGCCTCGCGCGTAAGTTCACCGATCTGGTCGCGCCCGTGCGCGGCGAGAAAGCCGCCGAGCGGCTGCTCGCCGTGCTCTGGCAGATCGAAAGCGCCGACGACGTATCGGAGCTGCTCGACCTCGCGGCGTTGCCCGCGACTTAA
PROTEIN sequence
Length: 469
MAGAAHQRTFARGAGPTAALLDFAHRLRWRDLDAEVRHEAKRHLLDTLGVMIAGGAGDVASKADAVLTTIRPAGGAVPVPGRARRVDRLDAAWLGGTGAHGIELDDGYREGSVHPGVAVVPALLSAAYGDKVSGERLLEAMVAGYEAVTAIARAGHPMARQRGFHPTGIVGSLGAALASARLLGLPRAQTANALGLAASASAGLFAFLAGGGDVKRLHAGHAAREGLTAALLSRGGVEGPPDVLEGPDGFFQAFPGDADRVAANFKLPPDAPFGVVDCYFKPYACCRHLQPAVEAMMTLCRDHGLVEQDIQRIDVETYAIATSHAETRWGDFASAQLSFPFIMALGLRYGRIDLKHFEDDIRADAGLAEACKLVHVRTAPDLDAMYPSRRPARVKLITTKGEFSREAFEAIGSRDLPLDDDGLARKFTDLVAPVRGEKAAERLLAVLWQIESADDVSELLDLAALPAT*