ggKbase home page

SCN18_25_1_16_R1_B_scaffold_1952_7

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 3605..5020

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.7
  • Coverage: 464.0
  • Bit_score: 888
  • Evalue 3.40e-255
leuC; isopropylmalate isomerase large subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 92.5
  • Coverage: 464.0
  • Bit_score: 885
  • Evalue 4.40e-255
3-isopropylmalate dehydratase large subunit n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T5D0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 464.0
  • Bit_score: 888
  • Evalue 2.40e-255

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGTCCGATTCAAAATCCGCCACCACCTTGTACGACAAGATCTGGAACGATCATCTGGTCCACGAGGCCGATGACGGCACCTGCCTGCTCTATATCGACCGCCATCTGGTCCATGAGGTGACCTCGCCGCAGGCGTTCGAAGGTCTGCGCACTTCGGGCCGCAAGGTTCATGCGCCGGAGAAGACGCTGGCCGTGGTCGATCACAACGTCCCGACCACCGACCGCTCCAAGCCCAATCCCGATCCGGAGAGCGCCGAGCAGATCGCCGCGCTGGCGCAGAACGCCAAGGACTTCGGCATCGAATACTATAACGAGTTCGACAAGCGGCAGGGCATCGTTCACGTCATCGGCCCGGAGCAAGGCTTTACCCTGCCCGGCACCACCATCGTCTGCGGTGACAGCCACACCTCGACCCATGGCGCGTTCGGCGCGCTGGCGCACGGCATCGGCACCTCCGAAGTCGAGCACGTCCTCGCCACGCAGACGCTGATCCAGAAGAAGGCGAAGAACATGCGCGCGGTGGTCGACGGCAAATTGCCGGACGGCGTCACCGCCAAGGATATCATCCTCGCCATCATCGGCGAGATCGGCACCGCGGGCGGCACCGGCTACGTGCTGGAATACGCCGGCGAGGCGATCCGCGCGCTGTCGATGGAAGGCCGCATGACGGTCTGCAACATGTCGATCGAAGGCGGCGCGCGTGCCGGCCTGATCGCACCGGACGAAGTCGCCTATGAATTCCTGAAAGGTCGCAACAAGGCGCCGAAGGGCGATGCATGGGATGCCGCGCGGCGCTACTGGGACACGCTGCGCAGCGACGCGGGCGCGCATTTCGATCACGAAATCCGCCTCGACGCCGCCTCGCTGCCGCCGATTGTCACCTGGGGCACGTCGCCCGAGGACGTCATCTCGATCACCGGCGTGGTGCCCGATCCCGACAAGATCGCCGACGAAGCCAAGCGCATCTCGAAGCATCGCGCACTCGATTACATGGGCCTGAAGGCCGGCACCAAAATCACCGACATCAAGCTCGACCGCGTCTTCATCGGCTCTTGCACCAACGGCCGCATCGAGGATCTGCGCGCGGCGGCGAAGGTTGCCGAGGGCAAGACCGTCAACGGCAACGTCAACGCCATGATCGTGCCGGGCTCGGGCCTGGTGAAAGAGCAGGCCGAAGCCGAAGGTCTCGACAAGATCTTCATCAAGGCCGGCTTCGAATGGCGCGAGCCGGGCTGCTCGATGTGCCTCGCGATGAATCCCGACAAGTTGTCGCCGGAGGAGCGTTGCGCCTCGACCTCGAACCGCAACTTCGAAGGCCGTCAGGGCTTCAAGGGCCGCACCCATCTGGTGTCGCCTGCCATGGCGGCGGCGGCGGCGATCGCCGGCCACTTCGTTGACATCCGCGACTGGCACTGA
PROTEIN sequence
Length: 472
MSDSKSATTLYDKIWNDHLVHEADDGTCLLYIDRHLVHEVTSPQAFEGLRTSGRKVHAPEKTLAVVDHNVPTTDRSKPNPDPESAEQIAALAQNAKDFGIEYYNEFDKRQGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRAVVDGKLPDGVTAKDIILAIIGEIGTAGGTGYVLEYAGEAIRALSMEGRMTVCNMSIEGGARAGLIAPDEVAYEFLKGRNKAPKGDAWDAARRYWDTLRSDAGAHFDHEIRLDAASLPPIVTWGTSPEDVISITGVVPDPDKIADEAKRISKHRALDYMGLKAGTKITDIKLDRVFIGSCTNGRIEDLRAAAKVAEGKTVNGNVNAMIVPGSGLVKEQAEAEGLDKIFIKAGFEWREPGCSMCLAMNPDKLSPEERCASTSNRNFEGRQGFKGRTHLVSPAMAAAAAIAGHFVDIRDWH*