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SCN18_25_1_16_R1_B_scaffold_1492_2

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(617..1822)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IBF1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 401.0
  • Bit_score: 667
  • Evalue 5.70e-189
ABC transporter permease {ECO:0000313|EMBL:KJC60445.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 401.0
  • Bit_score: 673
  • Evalue 1.50e-190
substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 401.0
  • Bit_score: 652
  • Evalue 5.30e-185

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
GTGAGGACGATTTTATCGGGTGTTATGGCGTCATTGCTGGCGCTTACGGCGAGTGCCGCGCTAGCGCAGAGCAAGCCGCCGTTGAAGCTCGGTGCGATCCTCGACATGTCCGGCCTCTATGCGGACATCACCGGTGTCGGCAGCGAGACTGCCGCGAAGATGGCGGCGGAAGATTTCGGCGGTGAGGTGCTCGGCCGCAAGATCGAGATCATCGCGGCAGATCATCTCAACAAGGCCGATCTGGCGGGCAACATTGCCCGTGACATGCTCGACAATCAGGGCGTCGAGGCCATCGTTGATGTTGCGGCATCGGCGCCGGCGTTGTCCGCACTCGAAGTGGCGAAAGCGCGCCACAAGATCATCATGTTCAGCGGTCCCGGTTCGATCCGTCTGACCAACGAAGCGTGCACGCCTTACAGCGTCCATTACGTCTACGACACCTATGCGTTGGCGAACGTTGCCGGATTGGCGACCGTCAAGCAGGGCCTGGATAGTTGGTTCTTCCTGACCGCCGATTATTCGTTTGGACACGACCTTGAGAAAGACACCACCAACGTCATCGTCAAGTCCGGCGGCAAGGTACTGGGAAGCGTGCGGCATCCGACCAACATACCGGATTTCTCGTCTTATCTGTTGCAGGCTCAGGCTTCGAAAGCGAAGGTGATCGGCCTCGCAAACGCCGGCGGCGATACTATCAACGCCATCAAGCAGGCTGCCGAATTCGGTCTAATGAAGAGCGGCCAGAAAATCGCGCCGCTATTGGCCTACATTACCGACATCGATAGCGTCGGCTTGCAAACGGCTCAGGGCCTGCTGCTCGCTGAAGCCTTCTATTGGGACATGAACGACGAGACGCGCGCCTTCTCCAAGCGTTTCATGGAGCGGGTCAAGCGCGTTCCGACTTCGTCACAGGCCGGTGTCTACTCATCCGTGCTGCATTATTTGAAGGCGGTGAAGCAGGCCGGCACCACCGATGCGGACGCCGTCATGAAGAACATGAAAGAGACGCCGATCAACGACATGTTCGCCAAGAACGGCAGGATCCGCGAGGATGGTCGCATGGTTCACGATATGTATCTGTTCGAGGTCAAGTCACCTGCCGAATCCAAAGGCCGCTGGGACGACTATAAGCTGCTCGCCACGGTGCCCGGCGATCAGGCATTCCAGCCGCTGTCGGCTTCGCGCTGTCCGCTGGTGAAGAAGTAG
PROTEIN sequence
Length: 402
VRTILSGVMASLLALTASAALAQSKPPLKLGAILDMSGLYADITGVGSETAAKMAAEDFGGEVLGRKIEIIAADHLNKADLAGNIARDMLDNQGVEAIVDVAASAPALSALEVAKARHKIIMFSGPGSIRLTNEACTPYSVHYVYDTYALANVAGLATVKQGLDSWFFLTADYSFGHDLEKDTTNVIVKSGGKVLGSVRHPTNIPDFSSYLLQAQASKAKVIGLANAGGDTINAIKQAAEFGLMKSGQKIAPLLAYITDIDSVGLQTAQGLLLAEAFYWDMNDETRAFSKRFMERVKRVPTSSQAGVYSSVLHYLKAVKQAGTTDADAVMKNMKETPINDMFAKNGRIREDGRMVHDMYLFEVKSPAESKGRWDDYKLLATVPGDQAFQPLSASRCPLVKK*