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SCN18_25_1_16_R1_B_scaffold_2406_2

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(1784..2845)

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 344.0
  • Bit_score: 573
  • Evalue 1.80e-160
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37) similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 341.0
  • Bit_score: 572
  • Evalue 8.10e-161
Uroporphyrinogen decarboxylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=DCUP_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 341.0
  • Bit_score: 572
  • Evalue 2.90e-160

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
TTGGCACATTCGTCCTCGACCGCAACGACCGTGACGCAACCCTTCATGGAGGTCTTGCACGGCCAACGCCAAAGCGTGCCGCCGGTCTGGATGATGCGACAGGCGGGACGCTATCTGCCGGAGTATCGCGAGCTGCGCGCCAAGGCCGGCAGCTTCCTTGATCTCTGCTTCACACCGGACTACGCCGCCGAGGTGACGCTGCAACCGATCCGCCGCTTCAAGTTCGATGCGGCGATCATCTTCTCCGACATCCTTGTGATTCCGCACGCCCTCGGCCGCTCCGTTCGCTTTGAAGTCGGCGAAGGACCACGGCTCGATCCGCTCGATACGCCGGAGTTGATTGCGACACTCGCAGCACAAGCAGACGATACGAAACTCGAACCGGTCTACGAGGCGCTGCGCCGGGTGCGGCGCGACCTCGATCCATCGGTGGCGTTGATCGGATTTTGCGGCGCACCATGGACGGTTGCGACCTACATGGTCGCCGGGCGCGGCACGCCGGATCAGGCGCCGGCGCGGCTGCTGGCCTATCGCCATCCCAAAGCGTTTGCCCGCATCATCGATGTGCTGGTCGATGCCTCGATCGGCTATCTCGTCAAGCAACTCGCCGCCGGCGCGAATGCGTTGCAGATCTTCGACACTTGGGCCGGCGTGCTGCCGCCGCGCGAATTCCAGCACTGGTCGGTCGAGCCGACGCGCCGCATCGTCGAAGGCGTCCGCAAGGCGGTTCCCGATGCGAAGATCATCGGCTTTCCGCGCGGCGCTGGCGCGCAGTTGCCGTCCTATGTCGCGCAAACTGGTGTTGATGCCGTCAGCATCGACTGGACGGCCGAGCCAAAGCTGATCCGTGATCACATCCAGAATTGTGTTGCGGTGCAAGGCAATCTCGATCCGCTCGCGCTGATTGCCGGCGGCAATACGCTCGACCAGGCGGTCGACGACGTTTTGGAAAACTACGCCGATGGCCGACTGATCTTCAATCTCGGCCACGGCATCACGCCGGAAACGCCGATCGCCCATGTCGAGCAGATGCTGCGGCGCGTGCGCGGCCACCGCGCGTAA
PROTEIN sequence
Length: 354
LAHSSSTATTVTQPFMEVLHGQRQSVPPVWMMRQAGRYLPEYRELRAKAGSFLDLCFTPDYAAEVTLQPIRRFKFDAAIIFSDILVIPHALGRSVRFEVGEGPRLDPLDTPELIATLAAQADDTKLEPVYEALRRVRRDLDPSVALIGFCGAPWTVATYMVAGRGTPDQAPARLLAYRHPKAFARIIDVLVDASIGYLVKQLAAGANALQIFDTWAGVLPPREFQHWSVEPTRRIVEGVRKAVPDAKIIGFPRGAGAQLPSYVAQTGVDAVSIDWTAEPKLIRDHIQNCVAVQGNLDPLALIAGGNTLDQAVDDVLENYADGRLIFNLGHGITPETPIAHVEQMLRRVRGHRA*