ggKbase home page

SCN18_25_1_16_R1_B_scaffold_1669_6

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(5046..6407)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate-binding protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GW32_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 72.2
  • Coverage: 454.0
  • Bit_score: 670
  • Evalue 7.60e-190
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein similarity KEGG
DB: KEGG
  • Identity: 97.3
  • Coverage: 447.0
  • Bit_score: 878
  • Evalue 6.80e-253
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein {ECO:0000313|EMBL:CDM23645.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.3
  • Coverage: 447.0
  • Bit_score: 878
  • Evalue 3.40e-252

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGAAGGACAAAAAGACTTTGGGACAAGCCATGCAGACGCAGGTCAAGCGCCGTTCCGTGCTGAAAGCGGGCGCGGCGGGCGTGGCCGGCGGCATGCTGCTGCCCGGCACCGCCCGGGTTGCGCTGGCCGACGACAAGAAGCCCCTGGGGGCCTGGCCCGCCGGCGCCGATGGCGACTCCGTGTTCGTCGGCCTGACCGTCGACCTGACGGGGCCGTATTCGGCCCAGGGCGCCGAGCAGAAGAACGGCTACGAGCTGGCCGCCGAGCAGATCAACGCCGGGGCGCCCCAGGTCCAGAAGATCTCTCCGCTGATCAAGAAGGGCATCCTGGGCAAGAAACTGGTGCTCGGCTCGGCCGACGCCGAAACCAAGCCCAACACCGGCGTGCAGGCGGCCACCCGCTTCATCCATGACAACAAGGCCATGATGATCGCCGGCAGCACCAGCAGCGCGGTGGCCATCGCGCTGCAGAAGGTCTGCAACCGCGAGCACACCCCATACTTCACGGCTATTTCCGGCTCCAACGAAACGACCGGCGTGGACTGCCAGCGCTACGGCTTCCGCCTGTGCTATTTCGCCTACATGGCCTGCAAGGCCATCGCCCCGGTGGTCGCCAAGGAACTCGGCAAGAACCGCAAGGCCGCCTACCTGACGCCGGACTACACCTACGGCCACACCACCACCCAGTCCATGAAGGAGTTCACCGAGAAGGAAGGCTGGAAGACGGTCACCAACCAGGTCCACCCGCTGGGCGCCAAGGACTACAGCTCCTACCTGATCAACATCGCCAACACCGACGCCGACGTGCTGGTCGTCGTGGCCTACGGCGCGGACGCCGCCAACGCCATCAAGCAGGCCAAGCAGTTCGGCCTGCTCGACAAGATGAAGATCGTCATTCCCTACATGTCCGCCTACCTGGAAAAGGAAGTCGGCGCCGACGTCATGCAGGGCGTCTACGCCGCCCAGGGCTTCTGGTGGACCATGGAGGACCACAATCCCGTCGCCAAGGACTTCGTCGAGGCCTACGAGAAGAAGTTCGGCGGCAAGCCGCGGGATTCGGCCATGTACGCCTACCTGGCCCTGGTCCTGTGGGCCGACGCGGTGGAACGCGCCAAGAGCTTCTACCCGATCGACGTGGTCAAGGCCCTGGAGGCCGGCGAACTGCGCGACAGCCCGGTGGGCAAGGTCACGTTCCGCGCCGAGGACCACCAGGGCATCGTCGACTTCCCGATCCTGCGCGGCAAGAAGCCCGCCGACATGAAGAATCCGGAGGACTTCTTCGAGATCGTCCAGGTCGTCAGCGGCAAAGAAGTCCTGCCCCCGCTGGGCCTGCTGGGCTGCAAGATGGGCGATTACGTCTAA
PROTEIN sequence
Length: 454
MKDKKTLGQAMQTQVKRRSVLKAGAAGVAGGMLLPGTARVALADDKKPLGAWPAGADGDSVFVGLTVDLTGPYSAQGAEQKNGYELAAEQINAGAPQVQKISPLIKKGILGKKLVLGSADAETKPNTGVQAATRFIHDNKAMMIAGSTSSAVAIALQKVCNREHTPYFTAISGSNETTGVDCQRYGFRLCYFAYMACKAIAPVVAKELGKNRKAAYLTPDYTYGHTTTQSMKEFTEKEGWKTVTNQVHPLGAKDYSSYLINIANTDADVLVVVAYGADAANAIKQAKQFGLLDKMKIVIPYMSAYLEKEVGADVMQGVYAAQGFWWTMEDHNPVAKDFVEAYEKKFGGKPRDSAMYAYLALVLWADAVERAKSFYPIDVVKALEAGELRDSPVGKVTFRAEDHQGIVDFPILRGKKPADMKNPEDFFEIVQVVSGKEVLPPLGLLGCKMGDYV*