ggKbase home page

SCN18_25_1_16_R1_B_scaffold_1669_8

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(7334..7903)

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Pantoea sp. aB RepID=E0M1H6_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 183.0
  • Bit_score: 293
  • Evalue 1.40e-76
Dipeptide transport ATP-binding protein DppF similarity KEGG
DB: KEGG
  • Identity: 96.8
  • Coverage: 186.0
  • Bit_score: 360
  • Evalue 1.50e-97
Dipeptide transport ATP-binding protein DppF {ECO:0000313|EMBL:CDM23642.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.8
  • Coverage: 186.0
  • Bit_score: 360
  • Evalue 7.50e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
CGGGTCGGCCTGAGGCCGGAGCACTACAGCCGCTATCCGCACATGTTCTCCGGCGGCCAGCGCCAGCGCATCGCCATCGCCCGGGGCCTGATGCTGGATCCCGAGATCCTGGTCGCCGACGAGGCCGTCTCCGCGCTGGACGTGTCGGTGCGCGCCCAGGTGCTGAACCTGATGCAGGACCTGCAGCGCGACCTGGGCCTGTCCTACGTGTTCATCTCCCACGACCTGTCGGTGATCGAGCACCTGGCCGACGAGGTCATGGTCATGTACCTGGGCCGGGTGGTGGAGCAGGGCGCCAAGGAGGCGATCTTCGGCCAGCCCCTGCATCCCTACACCCAGGCGCTGCTGTCGGCCACGCCGCGCCTGAACGACGCGGCCCGGCGCGAACGCATCAAGCTGTCGGGCGAGCTGCCCAGCCCGCTGAACCCCCCGCCGGGCTGTCCGTTCAGCTCACGCTGCCACCGGGTCATGCCGGTGTGCCGCGAGCGCCTGCCGGCCCTGCTGCCGCAAGGCGGGTGGCAGGTGGCCTGCTTCGCCGTCGAACAGGACCTGGGCACGGCATCCCCGTAG
PROTEIN sequence
Length: 190
RVGLRPEHYSRYPHMFSGGQRQRIAIARGLMLDPEILVADEAVSALDVSVRAQVLNLMQDLQRDLGLSYVFISHDLSVIEHLADEVMVMYLGRVVEQGAKEAIFGQPLHPYTQALLSATPRLNDAARRERIKLSGELPSPLNPPPGCPFSSRCHRVMPVCRERLPALLPQGGWQVACFAVEQDLGTASP*