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SCN18_25_1_16_R1_B_scaffold_1694_1

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 3..1826

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate-selective porin OprB n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QR33_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 609.0
  • Bit_score: 982
  • Evalue 1.20e-283
carbohydrate-selective porin OprB similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 609.0
  • Bit_score: 982
  • Evalue 3.40e-284
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:ABE61314.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 609.0
  • Bit_score: 982
  • Evalue 1.70e-283

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1824
TTCGGCTGGGGTCATTCCGCGACCACCTTGGCCGATCCGACAGCGATCGGCGCAAGCAACACTTTCGGCGGCATGATCGGCGGCCTTCAGGCCGGCGCCAATTGGGTGCTGCCGTCCGGTGTCCTGCTCGGGATCGAGGCCGATGTCTCGTTCCCCAACTATTATGAATCAAACTCTGTCGTCTCAGCGCTTGCGTCCACCCGTTCGGATGTCACTGAAAAGCTCGACATGGTCGGCACGGCGCGCGGCCGCCTCGGCATCGTCAATGGTCCATGGCTGACTTATGCAACCGGCGGCCTCGCCTGGAGCAGCACGCGCTTCGTCAACACGCCGGCATCCGGCGACGAGGAGAAGCAGCTTCGTCAGCGGTTCGGCTGGGTCGCAGGCGCAGGCGTCGAATATGCCTTCGCGCCCCATTGGTCGGCGCGGCTCGAATATCTCTATAGCGACCTCGGCAACACCAACGTCACTTTTGCGTCCGGCGCGCGTTACGCATCGACCCATAATTTTCAATCGCTGCGCATCGGGCTCAATCGCAAGATCGGTGATGCTGCATCCGGGCTGTCATCGCCGGCAAGTTGGATCGAGCCGGAATCCGACCGCTGGGAAATTCACGGCCAGACCACTTATCTCGCGCAAGGGTATCCGACGTTTCGCGCCCCCTACTCCGGCCCGAACAGCCTGTCGCCGAACGCCCAGATGAAAGCGACCTGGAGCAACAGCTTGTTCCTCAACGCGAGGCTGTGGGACGGCGGCGAGGTTTATTACAATCCCGAACTGGCGCAGGGCTTCGGCCTCAGCGACACCGTCGGCGCCGGCGGATTTCCCAGCGGCGAAGCGCAAAAATCCGATTTCCCCTATCCGCATTACAACACCTCACGACTATTCGTGCGGCAGACCTTCGGTTTCGGCGGCGAACAGGAAGAACTCGCCAGCGGACCGACGCAACTCGCCGGTAAGGCGGACGTCTCGCGCCTCACCGTTCAGGCCGGCAAGTTCGCGGTCACCGACGTGTTCGACGGCAATGCCTATGCGAAGGACCCGCGCCGCGATTTCATGAACTGGGCGATGTGGGCGCCGGGCGCATTCGACTACTCCGCCGACAAGGTCGGCCTGACCTATGGCACCACCGCCGAACTCAATCAGAAACAATGGGCGCTGCGCGCCGGCTATTTTCTGATGGACGCGGAATCCAATTCCAATAACTTCGATATGCGCCTGTTCCAACGCGGCGAGTACGTCGTCGAACTGGAAACGCGGTATTCGCTGTTCGGTCGTCCCGGCAAGCTGCGCACCATCGGCTGGCTCAACAGCGCCTACTCCGGCAGCTATCGCGAAACGCTGGCCAACCCGGCTTTCAATCTCGACATCGCTCAGACCCGTCGCGGCCGCATCAAATACGGCTACGTTCTCAATCTCGAACAAGCCGTGACGGACGACATCGGCCTGTTCGGACGCTGGAGCTGGAACGACGGCAAGACTGAGATCATGGCATTCACCGACATCGACGCCAGCCTCTCGCTCGGCGCATCGATCAAGGGCACGCGCTGGGGGCGTCCTGACGACGTGGTGGGGATCGGCGGCGCGGTCAACGCCCTGTCGAAAGACCATCGCGATTTCATTGCCGCCGGCGGGCTCGGCGTGCTGATCGGCGACGGCCGGCTGAATTATCGCAACGAGCGCATTCTCGAAGCCTATTACGCCTTCGCGCTCAACAAGCAACTGACCTTCACTGCCGACTATCAGCTGATCGTCAATCCGGCCTACAATGCCGACCGCGGCCCGGTCTCGATATTTTCAGGGCGCTTGCACGGCGAGTTCTAG
PROTEIN sequence
Length: 608
FGWGHSATTLADPTAIGASNTFGGMIGGLQAGANWVLPSGVLLGIEADVSFPNYYESNSVVSALASTRSDVTEKLDMVGTARGRLGIVNGPWLTYATGGLAWSSTRFVNTPASGDEEKQLRQRFGWVAGAGVEYAFAPHWSARLEYLYSDLGNTNVTFASGARYASTHNFQSLRIGLNRKIGDAASGLSSPASWIEPESDRWEIHGQTTYLAQGYPTFRAPYSGPNSLSPNAQMKATWSNSLFLNARLWDGGEVYYNPELAQGFGLSDTVGAGGFPSGEAQKSDFPYPHYNTSRLFVRQTFGFGGEQEELASGPTQLAGKADVSRLTVQAGKFAVTDVFDGNAYAKDPRRDFMNWAMWAPGAFDYSADKVGLTYGTTAELNQKQWALRAGYFLMDAESNSNNFDMRLFQRGEYVVELETRYSLFGRPGKLRTIGWLNSAYSGSYRETLANPAFNLDIAQTRRGRIKYGYVLNLEQAVTDDIGLFGRWSWNDGKTEIMAFTDIDASLSLGASIKGTRWGRPDDVVGIGGAVNALSKDHRDFIAAGGLGVLIGDGRLNYRNERILEAYYAFALNKQLTFTADYQLIVNPAYNADRGPVSIFSGRLHGEF*