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SCN18_25_1_16_R1_B_scaffold_1133_1

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 3..554

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase catalytic n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8INS9_METNO similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 128.0
  • Bit_score: 89
  • Evalue 2.90e-15
lytic transglycosylase similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 128.0
  • Bit_score: 89
  • Evalue 8.20e-16
Uncharacterized protein {ECO:0000313|EMBL:KEQ10248.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.5
  • Coverage: 143.0
  • Bit_score: 89
  • Evalue 3.10e-15

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
GCCGTATCCGCGCAATCGTCTCCACGATCAGCATCCCCGACCACCTGCTTCATGACAAAGCAGGCAGCGCAACAGCCAATCTATAGGGGGTCAATTTTGGACGCCGATCCCCCGGCTCAGGGGGTCACTATTGCAGGCCGAATAACACCAGGGTTCGCATCGGGCGGTTTCACGGGCTCGGGCGCTCGCTTGCAGCCCGCCGGCATCGTTCATGCGGGTGAGTTTGTGTTCAACCAGCAGGCAACGTCGCGACTTGGCGTCGGTTTTCTCAACGCGATGCATCAGAACGCATTGCACGGGTACGACGGTGGTGGCCTCGTCTCGCCGTATGCGTTGCCGTCCAATGTCGTTCCGTTCCGCGCGCCGGCAAATAACAATGGCGGTTCTGTCACGCAGAACTTTGCCGCTCCGCAGATCGTCATTAACGGCAACGTTGGGCCGAACGAGCTGGACGAGGTCAAGAGAATGCTTGCGCAACACCAGAAAGCCATTGCGGCGCAAGGAAAGGCGATGCAGAGCGCCCAGCGCTATCAAGCTACGGGTGTCGCCTGA
PROTEIN sequence
Length: 184
AVSAQSSPRSASPTTCFMTKQAAQQPIYRGSILDADPPAQGVTIAGRITPGFASGGFTGSGARLQPAGIVHAGEFVFNQQATSRLGVGFLNAMHQNALHGYDGGGLVSPYALPSNVVPFRAPANNNGGSVTQNFAAPQIVINGNVGPNELDEVKRMLAQHQKAIAAQGKAMQSAQRYQATGVA*