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SCN18_25_1_16_R1_B_scaffold_1147_8

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 4333..5211

Top 3 Functional Annotations

Value Algorithm Source
Cbb3-type cytochrome c oxidase subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V7S5_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 292.0
  • Bit_score: 467
  • Evalue 6.30e-129
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 292.0
  • Bit_score: 467
  • Evalue 8.80e-129
ccoP2; cbb3-type cytochrome oxidase, subunit CcoP similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 293.0
  • Bit_score: 463
  • Evalue 3.30e-128

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGGGGCACTTTGAACGCGACCCGCACACCGGCCACATGACGACCGGTCACGAATGGAACGGCATCACCGAACTCAACACGCCGGTGCCGAAGGTGATGTGGCTCTGGCTCGCCTGCTCGGTGATCTTCGCCATCGGTTACTGGATTTTGATGCCGACCTGGCCGATCGGCCGCACCTACACCAAGGGCCTGCTGGGCGACAACGTGCGTCACGACGTGGCGCAGTCGGTCAAGCAGGCGGCGCTCGACCGCAGCGTGTGGACCGCACGCATCGAGAAGGAAAGCTTCGCCGATATCCAGAAGGACCCGCGGCTAATGGAGCCGGTGCGCGAAACCGGACGCGCGCTGTTCGGCGACAACTGCGCCGCCTGTCACGGCCGCACCGCGCAGGGCGGCAAGGGCTTCCCCAACCTCACCACCCATTCGTGGCTGTGGGGCGGCACGCCGGAGGCGATCTTCGAGACCATCCGCGTCGGCATCAACTCGGCGCATCCGGAAACCCGCACCTCGCAGATGCCGGCGTTCGGCAAGGACGGCATGTTGCCGAAGGCCGATATCGACAAGGCGGTCGCCTTCGTCCGCAGCCTGTCGCATCCCGACGCCAAGGATCTCGATCCCGCCAAGGTGGCGGCCGGCAAGGAATTGTTCGCCGCCAACTGCGCCTCCTGTCATGGCGAGGACGCCAAGGGCAACATCGAGATGGGCGCGCCGAACCTGACCGATCAGTTCTGGATCTACGGCGGCGATCAGGCCTCCATCGCGGAGACGCTGTGGGGCGGACGCCAGGGCCACATGCCGACCTGGGAGAATCGTCTCTCGGCGCTCGACCGCAAGATCCTCGCGCTTTATCTCGTCGACCTGCGGAAGCCCGAGAAATGA
PROTEIN sequence
Length: 293
MGHFERDPHTGHMTTGHEWNGITELNTPVPKVMWLWLACSVIFAIGYWILMPTWPIGRTYTKGLLGDNVRHDVAQSVKQAALDRSVWTARIEKESFADIQKDPRLMEPVRETGRALFGDNCAACHGRTAQGGKGFPNLTTHSWLWGGTPEAIFETIRVGINSAHPETRTSQMPAFGKDGMLPKADIDKAVAFVRSLSHPDAKDLDPAKVAAGKELFAANCASCHGEDAKGNIEMGAPNLTDQFWIYGGDQASIAETLWGGRQGHMPTWENRLSALDRKILALYLVDLRKPEK*