ggKbase home page

SCN18_25_1_16_R1_B_scaffold_10722_2

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 1419..1619

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor Tu n=2 Tax=Oligotropha carboxidovorans RepID=EFTU_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 136
  • Evalue 9.90e-30
tuf; elongation factor Tu similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 136
  • Evalue 2.80e-30
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 136
  • Evalue 1.40e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Afipia_61_20 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGGCCAAAGAGAAGTTTGAACGCACGAAGCCGCATTGTAACATTGGGACGATCGGTCATGTCGACCACGGCAAGACGTCGTTGACGGCGGCGATCACCAAGGTTCTGGCGGAAGCTGGCGGCGCGACGTTCACGGCGTACGACCAGATCGACAAGGCGCCGGAAGAGAAGGCGCGCGGCATCACGATTTCGACCTCGCAC
PROTEIN sequence
Length: 67
MAKEKFERTKPHCNIGTIGHVDHGKTSLTAAITKVLAEAGGATFTAYDQIDKAPEEKARGITISTSH