ggKbase home page

SCN18_25_1_16_R1_B_scaffold_10839_3

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(532..1440)

Top 3 Functional Annotations

Value Algorithm Source
PEP1 n=2 Tax=Xanthomonas campestris pv. citri RepID=M1T448_XANCI similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 302.0
  • Bit_score: 458
  • Evalue 3.00e-126
Transposase similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 302.0
  • Bit_score: 458
  • Evalue 8.50e-127
PEP1 {ECO:0000313|EMBL:AGG37277.1}; Transposase {ECO:0000313|EMBL:CEI13267.1}; TaxID=434928 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri pv. citri.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 302.0
  • Bit_score: 458
  • Evalue 4.20e-126

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 909
GTGAGGCGGTACCTTCGGGACCAAAAGGCCGGTCGTTACGGCCCGCGTGCCCCGCGGTCGACCAAACTGGAGGGGTACAAGGATTATCTGCTTGAGCGCGTCAACCAGGCACGGCCGCGCTGGATACCAGCGACGGTGTTGCTGCGGGAGATCGTCGAGCTTGGCTACACGGGCGGAATAAGCCAACTGAAGGCGTGGCTGGTGCCGCTGAAGAAGGGTGAGCCGGAAGCGATCGTGCGCTTTGAGACGCCGCCGGGCAAGCAGATGCAGGCCGACTTTACGTGGGTGCGGCGCGGGCGGGATCCCTTGGTGGCGCTGGTGGCAACACTGGGCTACAGCCGAGCGACGTACGTGAAGTTCGGTCAGAAGGAGGATGTGGCGGCTCTCTGCACGGGGTTGCGCGAAGCTCTGGACTACTTCGGCGGCGTGCCCGAGCAGATTTTGTTCGACAATGCCAAAACCGTTGTCATTGAGCGCGATGCCTACGGAGCTGGGCTACATCGGTGGAACGATCGGCTGCTCGAATTAGCTGAAGAATGTGGCTTTGCGCCCCGACTGTGCCGTCCATACCGTGCCAAGACGAAGGGCAAGGTCGAGCGGTTTAATGGCTACCTCAAGGGCAGCTTCCTGGTGCCGCTGGCGGCGCGCCTGCACGCGACCGGCTTGAATCTGACGGCGGAAGTCGCCAACGCTCATGTACGGCGCTGGCTCGACGAGATCGCCAATGCGCGCGTCCATGCCACGACCAAAGCGATTCCGGCACGACGTCTGACCGAAGAGCGTGCTGTGATGCTATCGGCGCCGGCGCTGAAAGCGACGCCGGCGGTTCCGCTGCAGGTACCGGTTCCGGTCGAAAGCTTACAGCACCCGCTGTCGGTATATGACGCACTTTTGGAGGTGCGGCCATGA
PROTEIN sequence
Length: 303
VRRYLRDQKAGRYGPRAPRSTKLEGYKDYLLERVNQARPRWIPATVLLREIVELGYTGGISQLKAWLVPLKKGEPEAIVRFETPPGKQMQADFTWVRRGRDPLVALVATLGYSRATYVKFGQKEDVAALCTGLREALDYFGGVPEQILFDNAKTVVIERDAYGAGLHRWNDRLLELAEECGFAPRLCRPYRAKTKGKVERFNGYLKGSFLVPLAARLHATGLNLTAEVANAHVRRWLDEIANARVHATTKAIPARRLTEERAVMLSAPALKATPAVPLQVPVPVESLQHPLSVYDALLEVRP*