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SCN18_25_1_16_R1_B_scaffold_175_17

Organism: SCN18_25_1_16_R1_B_Chitinophagaceae_40_177

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38
Location: comp(20427..21026)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031, ECO:0000256|SAAS:SAAS00089872};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 192.0
  • Bit_score: 304
  • Evalue 6.70e-80
3-isopropylmalate dehydratase small subunit n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GS61_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 195.0
  • Bit_score: 273
  • Evalue 9.10e-71
3-isopropylmalate dehydratase small subunit similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 187.0
  • Bit_score: 273
  • Evalue 3.30e-71

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 600
ATGAACAAGAATCCAATTTCAGTTATATCCTCCACCGCTGTACCTCTTAACGTGGAAAATGTGGATACGGATCAGATAATCCCTGCCCGTTTTCTGAAGGCAACTACCAGGGAGGGTTTTGGCAAAAATCTTTTTCGCGATTGGAGATATGAAAAGAATGATGAAAAAAATCCGAAAAAAGATTTCGTTCTGAATAATCCTGTTTATTCCGGGAAAATCCTGGTGGCAGGAAAAAATTTCGGTTGCGGATCATCGCGTGAGCATGCAGCCTGGGCTATTAAAGATTATGGTTTTGATGTGGTGGTGAGCAGTTTCTTCGCAGATATTTTTAAAAACAATGCATTGAATAATTTCATTGTTCCTGTAAAGGTTAGCCCTGAATTTTTGAATGTTTTGTTTGGTGCTATTGAAAAAGATCCCTCAACAGTTATCACTGTTGATTTGCCACAGCAAACGATTTCAACAGAGAACGGCAAATCAGAGGTTTTTGAGATCAACAAGTACAAGAAAACATGTTTGATGAATGGTTATGATGACATTGATTATTTGTTAAGCATCAGACAGGAAATAGAAATATTTGAAAAAGATTATAAAAATTAA
PROTEIN sequence
Length: 200
MNKNPISVISSTAVPLNVENVDTDQIIPARFLKATTREGFGKNLFRDWRYEKNDEKNPKKDFVLNNPVYSGKILVAGKNFGCGSSREHAAWAIKDYGFDVVVSSFFADIFKNNALNNFIVPVKVSPEFLNVLFGAIEKDPSTVITVDLPQQTISTENGKSEVFEINKYKKTCLMNGYDDIDYLLSIRQEIEIFEKDYKN*