ggKbase home page

SCN18_13_7_16_R1_B_scaffold_3270_4

Organism: SCN18_13_7_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_63_8

near complete RP 45 / 55 MC: 3 BSCG 46 / 51 MC: 5 ASCG 9 / 38 MC: 2
Location: comp(2797..4002)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC branched-chain amino transporter, periplasmic binding protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IKB5_XANP2 similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 394.0
  • Bit_score: 580
  • Evalue 1.20e-162
putative ABC branched-chain amino transporter, periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 72.3
  • Coverage: 394.0
  • Bit_score: 580
  • Evalue 3.40e-163
Putative ABC branched-chain amino transporter, periplasmic binding protein {ECO:0000313|EMBL:ABS68458.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 394.0
  • Bit_score: 580
  • Evalue 1.70e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGAACTGCAAAACTTTCCTGATGACAGCCGCGGCCGTGCTGACGCTCGGCGGCGCGGCTCAGGCGGAAACTCCGATCAAGCTCGGCGTGCTCAACGACATGTCGAGCCTGTATGCGGACATCTCCGGGCCGGGCTCGGTGGTCGCCGCAAAGCTCGCCGTCGAGGATTTCGCTAAAATCAACCCGGACCTCAAGGTCGAGGTGATCGGCGCGGACCATCAGAACAAGCCCGACATCGGCAGCAACATCGCACGCCAGTGGTATGACCGCGAGAACGTCGACGTCATTCTCGACACCACTACGTCGTCTGTCGCGCTTGCCGTCTCCGAAGTGACCAAGGAAAAGAAGAAGATCTTCATTCCGTCGGGTGGCGGCACATCCGACCTCACCGGCAAATCCTGCTCGCCCTACACCGTACACTGGACCTACGACACCTGGGCACTCGCCAATGGCACCGGTTCGGCGATGACCAAGCAGGGCGCGGACACATGGTACATGCTGGTGGCGGATTACGCGTTCGGCGCGGCGCTGGAGCGCGATACCACCGAAGCCGTCACCAAGGCGGGCGGCAAGGTCGTCGGCAGCGTCAAGCATCCGCTGAATTCGTCGGACTTCTCATCGTTCCTGCTGCGCGCGCAAGCCTCCAAGGCCAAGGTGGTGGCGCTCGCCAATGCCGGCAGCGACATGATCAACACCATCAAACAGGCGGCGGAATTCGGCCTCACCCAGGGCGGCCAGTCGCTCGCCGGTCTTCTGATCTTCTCCAGCGACGTCAAGGCGCTTGGACTGCAAGCCGCTCAGGGACTGGTGCTGACCGAGGCGTTCTACTGGGACCAGACCGACGCGACCCGCGCTTTCTCCAAGCGCTTCGCCGAGAAGTTCAACGGCAAGATGCCGACCAGCTCGCAGGCCGGCGTCTATTCCAGCGTGCTGCACTACCTGAAGGCGGTCACCGCCGCGAAGTCGAAGGACTCCGACGTGGTGATGGCGAAGATGAAGGAACTGCCGATCGATGACGCGCTGTTCGGCAAGGGTTCGGTCCGCGCAGACGGCCGCGCCATTCACAACATGTATCTCTATCAGGTGAAGAAGCCGTCCGAATCGAAGGGCGAGTGGGATCTCTACAAGGTGCTCGCCACGATCCCGGCCGATGAAGCCTTCCGGCCGATGGATCAGGGTGGCTGTCCGCTGGTGGCGAAGAAGTAA
PROTEIN sequence
Length: 402
MNCKTFLMTAAAVLTLGGAAQAETPIKLGVLNDMSSLYADISGPGSVVAAKLAVEDFAKINPDLKVEVIGADHQNKPDIGSNIARQWYDRENVDVILDTTTSSVALAVSEVTKEKKKIFIPSGGGTSDLTGKSCSPYTVHWTYDTWALANGTGSAMTKQGADTWYMLVADYAFGAALERDTTEAVTKAGGKVVGSVKHPLNSSDFSSFLLRAQASKAKVVALANAGSDMINTIKQAAEFGLTQGGQSLAGLLIFSSDVKALGLQAAQGLVLTEAFYWDQTDATRAFSKRFAEKFNGKMPTSSQAGVYSSVLHYLKAVTAAKSKDSDVVMAKMKELPIDDALFGKGSVRADGRAIHNMYLYQVKKPSESKGEWDLYKVLATIPADEAFRPMDQGGCPLVAKK*