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SCN18_13_7_16_R1_B_scaffold_3731_6

Organism: SCN18_13_7_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_63_8

near complete RP 45 / 55 MC: 3 BSCG 46 / 51 MC: 5 ASCG 9 / 38 MC: 2
Location: comp(4553..6313)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IK46_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 591.0
  • Bit_score: 837
  • Evalue 4.60e-240
PAS domain S-box protein {ECO:0000313|EMBL:ERF84165.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 591.0
  • Bit_score: 837
  • Evalue 6.50e-240
putative two-component sensor histidine kinase transcriptional regulatory protein similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 587.0
  • Bit_score: 804
  • Evalue 1.20e-230

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1761
GAAGCCGCGCGGCTGGTGCCACTCCTCGGCAACGTCTCCTTCATCGAGCGGCCGTTCCATCCCACCACGCTGATCAGCATTGTCGGCTCCGCCATCCGGGGGCGGCGGCGGCAGTATCAGACCCGCGCGATTCTCCGGAACCTGATCGAAAGCAAGACCACGCTGCAAACCGCGCTCGATGTCGGGCGGCTCGGTGCGCTCGAAATGAAGATTCAGGAGCGCCGGCTCGAGGCGTCCGACACGTTCAAATCGTTTTTCGGAAGAGGGCCGGATGAGCCGCTGACGCTCGAGGACATGGAAGCGGCAGTTCATCCCGAGGATCGCGAACGCCGCCGCGAAGCATTCGAGACCGCCGTGATGAGCGGTCAGGACTACAGCGTCGAGTATCGGGCGATCTGGCCGGATCGATCGGTTCGCTGGGTCAACACCCATGCGACGATCTTTCGCGGCCTCGATGGCCAGCCCGCGACATTGATCGGCGTGGCGTCCGATGTCACGGCCCGCAAGATCGCCGAGATCGAGAGCGAGAAACTGGTGTCGCAGCTTGCGGCCGAACGTAGCGCGCTCGCCGAACTGACCGCCACGCTTGAACAGCGCGTTGGCGAACGCACCGCCGAATTGATGAAGGAAGTTGCCGCACGCGAAAAGGCGCAGGAGCAGTTGCGTCAGGCGCAGAAGATGGAATCGATCGGGCAACTCACCGGCGGCGTTGCGCACGACTTCAACAATTTGCTGATGGCCGTGGTGGGCAATCTGGAATTGCTGCGCAAGCGCGTGCCAAGCGATCCGCGGCTGCATCGCCTGATCGACGGCGCGTTGCAGGGGGCCGAGCGCGGCGCGTCGCTGACGCAACGGCTGCTCGCCTTCGCGCGGCAGCAGGACCTCAATCCGGCGCCCGTCGATCTCGGCGGATTGGTGCGCGGCATGAGCGAACTTCTGGAACGGTCGCTGGGTTCGCGCATCGTCTTGCGGTTGGCCGTCGCCGACGATCTGCCGCCGGCTGCGATCGACGCCAACCAGCTAGAACTCGCCGTCCTCAATCTTGCGATCAATGCGCGCGATGCTATGGCCGATGGCGGCACCATCGAGATCAAGATAGCGAAATCGCGAGTCACGCGAGATCCGGCCTTGCCGTCCGGCAACTACCTCAAGCTCTCGGTGCGCGATACCGGTGCTGGCATGTCGCCCGAGGTTCTCGCCAAGGCGATCGATCCGTTCTTCTCCACCAAGCCGCTCGGTAAGGGCACCGGGCTTGGGCTGTCGATGGTTCACGGCCTCGCGGTTCAACTCGGCGGCGCGTTGCAATTGGTCAGCACGGTCGGCAAGGGCACCACGGCCACGTTGATCCTGCCGATCGCGACCGCGCCGGTAGAGGTTGAAAGCCCCGCGCGCCCCGCTCCGAAGCAACCCCGTTCGGCGGTGATTTTGTTTGTCGACGACGATCCGCTGATCGCGATGTCGACCATGGAGATGCTGGAAGATCTCGGGCATCGGGTCATCGGTGCGTCCTCGGGACTGCACGCGCTGGATATCCTGCGCAGCGACCAGCAGATCGATTTGATGATGACCGATCACCTGATGCCCGGCATGACCGGCATCGAGCTTGCGGTGGCCTCGCGCGAGGTGCGGCCGCGGCTGCCGGTGTTGCTCGCGACCGGATATGCCGATCTTCCCGAAGGTGCTTCAACCGACGTGCCTCGTCTAGCCAAGCCTTATCATCAGGATCAGTTGCGCGACCGGCTTGAGCAACTGCTCGGCTGA
PROTEIN sequence
Length: 587
EAARLVPLLGNVSFIERPFHPTTLISIVGSAIRGRRRQYQTRAILRNLIESKTTLQTALDVGRLGALEMKIQERRLEASDTFKSFFGRGPDEPLTLEDMEAAVHPEDRERRREAFETAVMSGQDYSVEYRAIWPDRSVRWVNTHATIFRGLDGQPATLIGVASDVTARKIAEIESEKLVSQLAAERSALAELTATLEQRVGERTAELMKEVAAREKAQEQLRQAQKMESIGQLTGGVAHDFNNLLMAVVGNLELLRKRVPSDPRLHRLIDGALQGAERGASLTQRLLAFARQQDLNPAPVDLGGLVRGMSELLERSLGSRIVLRLAVADDLPPAAIDANQLELAVLNLAINARDAMADGGTIEIKIAKSRVTRDPALPSGNYLKLSVRDTGAGMSPEVLAKAIDPFFSTKPLGKGTGLGLSMVHGLAVQLGGALQLVSTVGKGTTATLILPIATAPVEVESPARPAPKQPRSAVILFVDDDPLIAMSTMEMLEDLGHRVIGASSGLHALDILRSDQQIDLMMTDHLMPGMTGIELAVASREVRPRLPVLLATGYADLPEGASTDVPRLAKPYHQDQLRDRLEQLLG*