ggKbase home page

SCN18_13_7_16_R1_B_scaffold_4126_4

Organism: SCN18_13_7_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_63_8

near complete RP 45 / 55 MC: 3 BSCG 46 / 51 MC: 5 ASCG 9 / 38 MC: 2
Location: 2598..3335

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Methylocystis parvus RepID=UPI0002E30F9E similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 244.0
  • Bit_score: 310
  • Evalue 1.10e-81
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 245.0
  • Bit_score: 310
  • Evalue 3.00e-82
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCJ08363.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 245.0
  • Bit_score: 310
  • Evalue 1.50e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
TTGGCGAAGGTTGTCTCGCTGGCGGTGCTGCTTGGGCTGTGGGCGTTGATCGCATGGCTGGCGCAGTCGCCGCTGCTGCCGAGCCCCATGAGCGTCGGCGAAATGATCGTCGCCGACACGCGGTCGGGCGAACTGCCGTTCCAGATGGCCTGTACGCTGGCGCGTGTGGCGGCGGCGTTCGCCATCGCCTTCACGCTGGGCGTCGCGGGCGGTTATGCGATGGGGCGTTCGAAACTGATCGACCGTTATGCGGATCCGTGGCTGGTGGTGCTGCTCAACCTGCCGGCGCTGGTGATCATCATCTTCGCGTACATCTGGATCGGGCTCAACGAGACGGCGGCCATCGTCGCGGTGGCGCTCAACAAACTGCCGAATGTGATCGTGGTGACGCGGGAGGGAGCACGCTCGCTCGATCCAGCGCTCGACGACATGGCGCAGGCCTTTCGCTTCACCTGGCAATCGAGGCTCCGCAACGTCGTGCTTCCGCAACTGGCGCCGTATCTTGCGGCGGTGTCGCGCTCGGGATTGTCGATCATCTGGAAGATCGTGCTGGTGGTCGAACTGCTGGGGCGTCCGAACGGTGTCGGCTTTGTGCTCGGCTCGTCGTTCTCGCTGTTCGATATGACGCGGATTTTGAGCTATGCGATCTCTTTCGTCGCGCTTATGCTCGCCATCGAAACATTCCTGGTGCAACCGCTTGAACGACGCACGAACCGCTGGCGCCGCAACGCCGCTTGA
PROTEIN sequence
Length: 246
LAKVVSLAVLLGLWALIAWLAQSPLLPSPMSVGEMIVADTRSGELPFQMACTLARVAAAFAIAFTLGVAGGYAMGRSKLIDRYADPWLVVLLNLPALVIIIFAYIWIGLNETAAIVAVALNKLPNVIVVTREGARSLDPALDDMAQAFRFTWQSRLRNVVLPQLAPYLAAVSRSGLSIIWKIVLVVELLGRPNGVGFVLGSSFSLFDMTRILSYAISFVALMLAIETFLVQPLERRTNRWRRNAA*