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SCN18_13_7_16_R1_B_scaffold_8481_1

Organism: SCN18_13_7_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_63_8

near complete RP 45 / 55 MC: 3 BSCG 46 / 51 MC: 5 ASCG 9 / 38 MC: 2
Location: comp(3..3071)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 1038.0
  • Bit_score: 1046
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4G9_SPHTD similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 1038.0
  • Bit_score: 1046
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 1038.0
  • Bit_score: 1046
  • Evalue 0.0

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3069
GTGAATCTCAACCTCCTTCTCGCAAACTTGGAGCGATCGCCCGAACTGGCCTCGCTGCCCGACCGTTTCGCAACTGGCGAGTCGACGACAGCGTTGACGGACGTGCCTGCGGCCGCGCGCGCGCCGCTCATCGCCGCCGCCGCGCTGCGCAACTCAGCGCCGACGCTCATCGTCGTGTCTCGCTTCGACCGGGCGGAAGCGCTTCTGGCTGCGGTCAATGAGTATTTGCCCGCCGATCGCCGCGCCGAGCTTTGGCCCGCGCCGGAAGCGCTGCCCTATGAGCAATTGCCGCTTGACCTCACCGCCGCGACTCGCCGCGTGGCGCTCCTCGCCAAATGCCTGGATTACGATGCTGGTTTGCCTCCCATCATCGTTGCGACCCCGCGCGGCCTCATGCATATGGTCATGTCTCCGTCCGAGCTTCAGGAGCATTCACGACGGCTGCATCTTGGCGGGCGAGTCGCGGCGACTGATCTGATCGCCTGGGCAACCTCGGCCGGTTACCAACCGGTGCCGCTCGTGCAGGAGCCGGGCACATTCGCGCGACGAGGTGGGATCATCGACATCTTCCCGCCCGCCGCCGCCGAGCCAATCCGCATCGACCTCTTCGGCGACGACATCGAATCGATCCGCACGTTCAACTCATCGTCGCAGCGCTCAGACAGGCGTCTTTCTGAGGTCTCGCTCCTGCCCACCTTCGACCTTCCAGCATGGAGGATGCCCGAGGCAGCGCAAGCAGTCGCGAAGCTGAACCGGCGGAAGCTGCGCACGGAAGTGGACGCGGAGTGGGGCCGCGCGATTGAGCGACTAAAGATGGGGTCCGCCCCGCCGGCGGTCGAACTCTTTTCCGCCTACCTCGCGCCCGAACGCTCATCGTTGCTGACCTACCTTCCGGACGAGGCGCTGGTCGTGCTCGATGAGCCCGCGGCGATCGAGCGAGCCGCGGCACAAATCGAAAGCTACGCGGCCGAGCTTCTCGATGGTTTCATCGCAAGCGGCGAGCTTCCCGCCGGATTGAAGCAGCCGTTCCTCAATTGGGAGACGCTGCGGACGGCGATCCACGAGCGCCGGCGATTCGAGATCGGAACCGGCAAAGCAGCGACCATCGATGACAACCTGACGATTTTCGGCATACCGCCGATCTTCGCCGGGCGGACCGCGGCGCTCGTCGAAGACGTGCGGGATCGGCTCGCCGCTGGTTGGAGCATCGCTGTCGCGACCGACCAGGTTGATCGGCTCACCGAAATCTTCGAGGAGCGCGAGATCTATCCGCGAAAGCATAAACGCGGACAACTAGCGGATGCCGGACCATTGCCCCCGGGCACCTTGGCGCTCACGGCTTCCGACCTCACCGAAGGCTGGATGACCGAGTCGATCAAGCTGCTTGTTCTGACCGATCTCGAAATCTTCGGCTTCCGCAAGCAGCCGCGCCACGGCGCCCAGAAGTCGTTGTCGGAACAAGTTGCGTTCGCCAGCAGCTTGACGCCAGGCGAATTCGTCGTCCACGTCGATCACGGCATCGCCAAATTCACCGGCCTGGTTCGCCTCGACACCAATGGCGTCGAGCGCGAATACCTGCTGCTCGAATATGCCAAGGGCGACAAGCTCTACGTCCCGGTTGACCAGAGCGACCGGGTCACCCGGTACAGCGGCGGAATCGATCCGCAACCGACGAAGCTCGGCTCGGGCGAGTGGGTTCGCGCGAAGCAACGCGTCCGCAAAGCCGTCCGAGAGATGGCGTTTGAGCTGATCCAGCTCTACGCCGCCCGCGAGGCCGCCGACAGTCCGCCCTTCCCTGCCGACACGACCTGGGACGGCGAGTTGGCCGAGTCATTCCCCTACACGGAGACGATCGATCAGCAAAAGGCGATCGACGACGTCAAGGACGACATGCAATCGAGCCAGCCGATGGATCGACTCGTCTGCGGTGACGTCGGATTCGGAAAAACGGAAGTCGCGTTGCGGGCCGCGTTCAAGGCCGTGAACGGCGGCAAGCAAGTCGCCGTGCTCGTGCCGACGACCGTGCTCGCGCTCCAGCACTTCGAGACATTCAAGAACCGCCTCGCCGCCTTCCCGGTTCGCGTCGAGATGCTCTCCCGTCTTCGCTCGAAAAAGGAGCAGGCAGAGGCAATCGAGGCACTTGGGCAGGGCGGCGTTGACATCGTCATCGGCACGCATCGCCTCGTCCAAAAGGATGTGAAGTTCAAGGACCTCGGCCTCGTCATCATTGACGAGGAGCAGCGGTTCGGCGTGCGCCAGAAAGAGTTCCTGAAGCAACTAAGGACGGAAGTCGATGTGCTGACCATGAGCGCGACGCCGATCCCGCGCACGCTGCATCTCTCGCTGGCGGGCATTCGCGACATCAGCGTGATCGACACCGCCCCCCGGTCGCGCGTGCCGATCCGCACCTTCGTCAGCGAATCGAGCGATCACTTGATCCGTGAGGTGATCATGCGCGAGCTCGAGCGCGGCGGTCAGGTTTATGTCGTGCACAACCGCGTCCACAGCATCGACTCGTTCACCCACAAGCTTCGCGAGATCGTGCCCGAGGCGCGCTTCGGCATCGGGCACGGCCAGATGGACGAGCACGTCCTCGAAGAAGTGATTCTCTCGTTCGTCCGTCACGAGTACGATGTGCTCGTCTGCACGACGATCATCGAGTCCGGGATCGACATCCCGAACGTCAACACCATCATCATCGACGACGCCGATCGGTTCGGTCTGACGCAGCTTTACCAGTTGCGCGGGCGCGTCGGCCGCGGCGATCATCGGGCCTACGCGTATCTTCTGGTTCGTCCGCACAAGGCCCTTTCGGAGGAGGCGCAGGCGCGGCTCGACGCGATCCAAGAGGCGACCGAACTCGGCGCGGGCATTCGCGTGGCGATGCGCGACATGGAGATTCGCGGCGCGGGAAACATCCTCGGCGCCGAACAGAGCGGCCACATCGCCGAAATCGGCTTCGATCTCTACATCCGCCTGCTCAGCCGCGCGGTTGAAGAAGTCAAGGCCGGGCGTCTCTACGCCGAGGAGACGCCGATAACGCTCGATCTGCCCCTAACTGCGCTCTTC
PROTEIN sequence
Length: 1023
VNLNLLLANLERSPELASLPDRFATGESTTALTDVPAAARAPLIAAAALRNSAPTLIVVSRFDRAEALLAAVNEYLPADRRAELWPAPEALPYEQLPLDLTAATRRVALLAKCLDYDAGLPPIIVATPRGLMHMVMSPSELQEHSRRLHLGGRVAATDLIAWATSAGYQPVPLVQEPGTFARRGGIIDIFPPAAAEPIRIDLFGDDIESIRTFNSSSQRSDRRLSEVSLLPTFDLPAWRMPEAAQAVAKLNRRKLRTEVDAEWGRAIERLKMGSAPPAVELFSAYLAPERSSLLTYLPDEALVVLDEPAAIERAAAQIESYAAELLDGFIASGELPAGLKQPFLNWETLRTAIHERRRFEIGTGKAATIDDNLTIFGIPPIFAGRTAALVEDVRDRLAAGWSIAVATDQVDRLTEIFEEREIYPRKHKRGQLADAGPLPPGTLALTASDLTEGWMTESIKLLVLTDLEIFGFRKQPRHGAQKSLSEQVAFASSLTPGEFVVHVDHGIAKFTGLVRLDTNGVEREYLLLEYAKGDKLYVPVDQSDRVTRYSGGIDPQPTKLGSGEWVRAKQRVRKAVREMAFELIQLYAAREAADSPPFPADTTWDGELAESFPYTETIDQQKAIDDVKDDMQSSQPMDRLVCGDVGFGKTEVALRAAFKAVNGGKQVAVLVPTTVLALQHFETFKNRLAAFPVRVEMLSRLRSKKEQAEAIEALGQGGVDIVIGTHRLVQKDVKFKDLGLVIIDEEQRFGVRQKEFLKQLRTEVDVLTMSATPIPRTLHLSLAGIRDISVIDTAPRSRVPIRTFVSESSDHLIREVIMRELERGGQVYVVHNRVHSIDSFTHKLREIVPEARFGIGHGQMDEHVLEEVILSFVRHEYDVLVCTTIIESGIDIPNVNTIIIDDADRFGLTQLYQLRGRVGRGDHRAYAYLLVRPHKALSEEAQARLDAIQEATELGAGIRVAMRDMEIRGAGNILGAEQSGHIAEIGFDLYIRLLSRAVEEVKAGRLYAEETPITLDLPLTALF