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SCN18_13_7_16_R1_B_scaffold_8004_2

Organism: SCN18_13_7_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_63_8

near complete RP 45 / 55 MC: 3 BSCG 46 / 51 MC: 5 ASCG 9 / 38 MC: 2
Location: comp(811..2022)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07UR9_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 81.1
  • Coverage: 402.0
  • Bit_score: 638
  • Evalue 2.80e-180
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 402.0
  • Bit_score: 638
  • Evalue 8.00e-181
Extracellular ligand-binding receptor {ECO:0000313|EMBL:ABJ04315.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 402.0
  • Bit_score: 638
  • Evalue 4.00e-180

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGAACGAAAGAATGATGATGGCGGGTCCGATCGATCCTGATGTCGAACAACGCGGAGCAACACGGCGGGCTGCCCTCGGGCTGATCCTCGGGACGCCGCTGCTCGGCGCCTGCGCCGGCGTGCAAAATGCGTTGACGGGCAATGGATCGCAGCAGGCTTCGGGACCGCAGCAACAGCCGCAGTCGGTCGGCACCGGTCAAGTCAAGGTCGGCTTGATCCTGCCACTGTCGGCTTCGGGCAATGCTGGCGTCGCCGCGCAATCGATGAAGAATGCCGCCGAGATGGCACTGGCGGAATTCCAGAATCCAAATCTGCAATTGCTGATCAAGGACGATGCGGGCAATGCGCAGGGTGCGCAGCAAGGCGCGCAGCAGGCACTCGACGAAGGCGCCGAAATTATTCTCGGGCCGTTGTTCGCGGCGTCGGTGCCGGCGGCTGCCCAACTGACGCGCGCGCGGGGCATTCCGATGATCGCGTTCTCGACCGACTCGAGCGTGGCCGGGCGTGGCGTTTATTTGCTGAGCTTCCTGCCGGAGTCGGATGTCACGCGGATCATCGACTATGCGTCCGGAACGGGTAAGCGCTCCTATGCGGCGCTGTTGCCGGAAAATGCCTACGGCAACGTGGTGGAAGCGGCCTTCAAACAGGAGGTCAGCCGCAAGGGCGGTCGCGTGGTGGCCTTCGAGAAATACGGTTCGGATCGCAGCAACGCCGTACGCAACGTGGCGCAGGCGCTGGGAAGCGCGGATGCGCTGTTCCTGGCCGATGACGGGGATGCTGTGGTCGGTGTCGCTGAGGCATTGACTGCGGCGGGAGCCAATCTCAAGCGCGTGCAATTGCTCGGCACCGGCTTGTGGGATAGCCCGCGTGTGTTCGCCAGTGCTGCGATGCAGGGCGGCCTTTATGCCGCGCCGGATCCGGCCGGCTTTCGCGCGTTCTCCGGGCGCTACAATACGAAATACGGCCGGCAGCCGGTCCGAACCGCGACGCTGGCCTACGACGCCGTGGCGCTGGTCGCGGCGTTGGCGCGCACGCAGGGCGCACAGAAGTTCTCGCCCGAAGTGCTCACCAATCCGTCCGGCTTCGCTGGCATCGACGGCCTGTTCCGCTTCCGGTCCGATGGCAGCAACCAGCGCGGCCTCGCGGTGATGCGCGTCGCCTCTGGCGGCGGTCAGCCTGTGGCTGGTTCGCCCAAGAGTTTTGGCGCGTAA
PROTEIN sequence
Length: 404
MNERMMMAGPIDPDVEQRGATRRAALGLILGTPLLGACAGVQNALTGNGSQQASGPQQQPQSVGTGQVKVGLILPLSASGNAGVAAQSMKNAAEMALAEFQNPNLQLLIKDDAGNAQGAQQGAQQALDEGAEIILGPLFAASVPAAAQLTRARGIPMIAFSTDSSVAGRGVYLLSFLPESDVTRIIDYASGTGKRSYAALLPENAYGNVVEAAFKQEVSRKGGRVVAFEKYGSDRSNAVRNVAQALGSADALFLADDGDAVVGVAEALTAAGANLKRVQLLGTGLWDSPRVFASAAMQGGLYAAPDPAGFRAFSGRYNTKYGRQPVRTATLAYDAVALVAALARTQGAQKFSPEVLTNPSGFAGIDGLFRFRSDGSNQRGLAVMRVASGGGQPVAGSPKSFGA*