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SCN18_13_7_16_R1_B_scaffold_7150_5

Organism: SCN18_13_7_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_63_8

near complete RP 45 / 55 MC: 3 BSCG 46 / 51 MC: 5 ASCG 9 / 38 MC: 2
Location: 3088..3651

Top 3 Functional Annotations

Value Algorithm Source
UPF0271 protein Rpdx1_2826 n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VJG3_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 188.0
  • Bit_score: 334
  • Evalue 7.00e-89
LamB/YcsF family protein similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 188.0
  • Bit_score: 334
  • Evalue 2.00e-89
UPF0271 protein Rpdx1_2826 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 188.0
  • Bit_score: 334
  • Evalue 9.80e-89

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGAGCATCGATCTCAACTGCGACCTCGGCGAAGGTTTCGGCGCATGGCAGATGGGCGACGACACCGCCATGCTCGGCCTCGCCAGTAGCGTCAACATCGCCTGCGGTTTTCATGCTGGCGATCCGGACATCATGCGCAAGACCGCCGAACTGGCGAAAGAGCGCGGCGTCGCCATCGGGGCGCATCCGGGCTATCGCGACCTGCACGGCTTCGGCCGCCGGCCGGTGGCGGGGCTCACTTACGCCGAGATCGAAAACCTCGTCGCCTACCAGATCGGCGCACTGCAAGCGGTGGCCGCGCTCGCCGGTCACAAGGTCACGCATGTGAAGGCGCACGGCGCGCTGTCCAACGTTGCCTGCGAAGACGATATGACCGCGCGCGCGATTGCGTCCGCGATCAAGGCGGTGGACCGCAACCTGACCTTCGTGGTGCTGGCGAACAGCAAGCTGTTGAAAGCCGGCGAAGCCGCCGGACTGCCGCTGGCGCACGAAGTGTTCGCCGACCGCGCCTATGAGGACGACGCCAACCTCGTCTCGCGCCGCAAGCCGGGTGCGGTGCTGCAC
PROTEIN sequence
Length: 188
MSIDLNCDLGEGFGAWQMGDDTAMLGLASSVNIACGFHAGDPDIMRKTAELAKERGVAIGAHPGYRDLHGFGRRPVAGLTYAEIENLVAYQIGALQAVAALAGHKVTHVKAHGALSNVACEDDMTARAIASAIKAVDRNLTFVVLANSKLLKAGEAAGLPLAHEVFADRAYEDDANLVSRRKPGAVLH