ggKbase home page

SCN18_13_7_16_R1_B_scaffold_248_16

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20_40_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 15145..15933

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FK83_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 258.0
  • Bit_score: 271
  • Evalue 4.50e-70
AraC family transcriptional regulator {ECO:0000313|EMBL:KFF07131.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 259.0
  • Bit_score: 276
  • Evalue 2.00e-71
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 258.0
  • Bit_score: 271
  • Evalue 1.30e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Flavobacteriales_40_20 → SCNpilot_BF_INOC_Flavobacteriales_40_20 → SCNpilot_BF_INOC_Flavobacteriales_40_20 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 789
ATGCTTCAGACAGATAAGTATTACCTTACGGAAGTTGACAAACACCCACAAAGTATATACTGCTACAATAATGAAATGCGGGAGCTTTTAATTGATAGTCATTCACATAAAAAGCATCAGTTTTTATATACGGAAGGAGGAATTGTGTTTGTGGAGACAGCCAGTAAGACATATTATCTTCCCGCACGGCATTTTATGTGGATTCCTGCCGGAATTGTACACAGTATCCGCACCAACAGAGAAGACGCTATTATGTTTAATTTATATTTTCCGGTAGAGGAGAATGAAGGTGATTTTTACAGGGAAGAAGGAATTTATCCTGTAGATGACTTGCTGTTAAAACTAATGAATTATTCTAAAAATTTCGAAACAGAGTTATTTCCGGCTGATGATAAATTTGTGATCGCATTGACCATCAAACGTATTCTTTCTGAAAAAACAACATTACAGCTGCCATTGGCATTACCCGTGGCAAAAAGTGAACGCTTAAATACAATTTTAGATTTTTTACATACGGAAGACGGAGATAATCTGACGTATGGAGCACTGGTTCGGAAATTTGGTTTTACGGAGCGAACATTACACAGAATTTTTAAAAAAGAGCTGGAAATGTCTTTTGCCCAATACCACACTATCCTGAAAATGATCCGGGCAATTGAACTATTGCTGGAGAAGCGTTTTTCCGTAGGCGAAATCGCCTCAGAAGTCGGGTATTCCTCTATTGCGACATTTAGCAACACATTCCATAAGTTTACAGGAAAACGTCCGAGTGAATATTTTGCAGAATAA
PROTEIN sequence
Length: 263
MLQTDKYYLTEVDKHPQSIYCYNNEMRELLIDSHSHKKHQFLYTEGGIVFVETASKTYYLPARHFMWIPAGIVHSIRTNREDAIMFNLYFPVEENEGDFYREEGIYPVDDLLLKLMNYSKNFETELFPADDKFVIALTIKRILSEKTTLQLPLALPVAKSERLNTILDFLHTEDGDNLTYGALVRKFGFTERTLHRIFKKELEMSFAQYHTILKMIRAIELLLEKRFSVGEIASEVGYSSIATFSNTFHKFTGKRPSEYFAE*