ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCN18_13_7_16_R1_B_scaffold_433_23

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20_40_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 24879..25184

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.2
  • Coverage: 101.0
  • Bit_score: 162
  • Evalue 2.70e-37
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IKJ1_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 76.2
  • Coverage: 101.0
  • Bit_score: 162
  • Evalue 1.90e-37
CRISPR-associated protein, Cas2 family similarity KEGG
DB: KEGG
  • Identity: 76.2
  • Coverage: 101.0
  • Bit_score: 162
  • Evalue 5.50e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 306
ATGTGGGTAATGGTATTATTTGATTTGCCGACGGAAACAAAAAAAGAACGTCGGGATGCTTCCTTGTTTCGAAAAAAACTTCTCGAAAACGGATTTATGATGTTCCAGTTTTCTATTTACATGCGTTTTTGCCAAAGTATGGAAAATGCGGAGATGCACACCGTACAGGTAAAAAGAATGCTGCCAGCTAAAGGAAAAGTGGGTATTTTTTCAATTACTGATAAACAATTCGGAAGAATGGAAATCTTTCATGGTAAAAAACCTCAGGAAAGTACTCCACCACCACAACAATTAACGCTTTTTTAA
PROTEIN sequence
Length: 102
MWVMVLFDLPTETKKERRDASLFRKKLLENGFMMFQFSIYMRFCQSMENAEMHTVQVKRMLPAKGKVGIFSITDKQFGRMEIFHGKKPQESTPPPQQLTLF*