ggKbase home page

SCN18_13_7_16_R1_B_scaffold_974_7

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20_40_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(5297..5644)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain-containing protein n=1 Tax=Imtechella halotolerans K1 RepID=I0WE50_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 115.0
  • Bit_score: 128
  • Evalue 3.60e-27
Helix-turn-helix domain-containing protein {ECO:0000313|EMBL:EID74666.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans K1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 115.0
  • Bit_score: 128
  • Evalue 5.00e-27
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 115.0
  • Bit_score: 119
  • Evalue 3.60e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Flavobacteriales_40_20 → SCNpilot_BF_INOC_Flavobacteriales_40_20 → SCNpilot_BF_INOC_Flavobacteriales_40_20 → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 348
ATGAGTGAAATTTCATACATAAATACTTATAGTGATAAAAATATCATGAAAGACATCGGAACATTTGTCCGACAAAAACGGATCGCTAAAAATCTGACACAACAGGAGCTGGCGGATCAGGCTGCAATGAGCCGCTCTACATTAAGCCTGATGGAACGCGGGGAGAATATCGTCTTGCTGAACCTAATTAAAGTACTGCGTATCCTGGATGTATTGTATGTATTTGAGAAGTTTCATCTGGAGCCTCAAATCAGCCCGATATTATTGGCTAAAGAAGAAGCGAAACGGCGGAAGAGAGTACGTACAGGTAAAAATGCAGGTCCGTCAAATTATGATTTAGGATGGTAA
PROTEIN sequence
Length: 116
MSEISYINTYSDKNIMKDIGTFVRQKRIAKNLTQQELADQAAMSRSTLSLMERGENIVLLNLIKVLRILDVLYVFEKFHLEPQISPILLAKEEAKRRKRVRTGKNAGPSNYDLGW*