ggKbase home page

SCN18_13_7_16_R1_B_scaffold_663_19

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20_40_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 27281..28711

Top 3 Functional Annotations

Value Algorithm Source
PSP1 domain protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG08_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 479.0
  • Bit_score: 519
  • Evalue 3.00e-144
PSP1 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.9
  • Coverage: 479.0
  • Bit_score: 519
  • Evalue 8.40e-145
PSP1 domain protein {ECO:0000313|EMBL:AEA43629.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 479.0
  • Bit_score: 519
  • Evalue 4.20e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1431
ATGGCATGCTCTAATTGTGGTTCCCATGATGGCGGTACACCCAGAGGATGCGGGAACAAAGGTACCTGTAGTTCTGGAGGTTGTAATAAATTGGAAGTCTTTGACTGGCTTTCCAATATGAGTTTACCGTTTGGACAAAAAACATACGAATTAGTTGAAGTACGTTTTAAGAACGGAAGAAAAAGTTTGTACCGTAATACAAAGGAACTGACTTTATATTCGGGAGATATTGTAGTAATTGAAGCCGTTCCCGGCTATGATGTGGGAGTTGTCTCACTTACGGGAGAGCTGGTTAAAATTCAGCAGGAAAAGAAATATTCCGATATTAAGATTACGGATTTCAGGAAAATTCTCCGGATTGCCAATCAGGAAGATATTGATAAATGGAAGACGGGAAGAGAAAGAGAAACCGAGCTGATGTATAAAAGTCGTGAGCTTGCTTCGAGAATTAAGCTGGATATGAAGATTTCCGATGTTGAATACCAGGGAGATCTTACAAAAGCGACTTTCTATTATACAGCGGAAGACCGTGTTGATTTCCGTCAGCTGATTAAAGATATGGCAGACGCGTTCCGGATTAAAATTGAAATGCGTCAGATCGGTGCACGCCAGGAAGCTGCCCGCTTAGGCGGAATCGGTTCCTGTGGACGTGAATTATGCTGCTCTACGTGGCTGACCGATTTCAGATCTGTTTCAACATCTGCGGCCAGATATCAGCAATTATCTCTGAATCCGCAGAAATTAGCCGGTCAGTGCGGTAAATTAAAATGCTGCCTGAATTATGAGCTGGATATGTATTTGGAAGGCATCAGAACCTTCCCGAGTGTGGATGCCCGTTTAAAAACAGAAAAAGGAGATGCGTCTCACGTGAAAACAGACATCTTTAAAAAATTGATGTGGTATTCTATTGAAAGTTCCAATTCACTGGTGGCTTTAGCTCCTGACAGAGTTGAAAAAATTCTTGAGATTAACCGTAAAGGTAAATTAGTGAAGGATCTTATTGAATTTGCGGCAGAAACACAATCGGCAGTTTCAATTGAGAAAGTGAATTTCATCGGAGTAGAAGAAGACGAAAGCTTTAACAGGTTGGCTCAGGCGCTTACGAGCGGGTCGAAGAAAGGCAAGAAGAAACGCCCTTCAGCTGATAACCGTCAGCAAAGATCCCGTCCGGACAGACCTAACAATTCTAATTCTAACAGAGGTGAGCGTTCCAACACACCCAGAAATGTACAACAGGGAGAGAACAGAGAACGTCCACAGCGAAGAGAACCCGGAAAAAATCAGCCACAGGCCGATAATATGACAAACGGAGGGAATGATCAAAATGTTCCGAAAGAGAACAAGCCGAGACACCGTCCGAATAATAACAACAGGAGAAGAAATAACAATAATAAAGGGAAACAGAATGATTCGGGGCAGCAGACTAGTTAA
PROTEIN sequence
Length: 477
MACSNCGSHDGGTPRGCGNKGTCSSGGCNKLEVFDWLSNMSLPFGQKTYELVEVRFKNGRKSLYRNTKELTLYSGDIVVIEAVPGYDVGVVSLTGELVKIQQEKKYSDIKITDFRKILRIANQEDIDKWKTGRERETELMYKSRELASRIKLDMKISDVEYQGDLTKATFYYTAEDRVDFRQLIKDMADAFRIKIEMRQIGARQEAARLGGIGSCGRELCCSTWLTDFRSVSTSAARYQQLSLNPQKLAGQCGKLKCCLNYELDMYLEGIRTFPSVDARLKTEKGDASHVKTDIFKKLMWYSIESSNSLVALAPDRVEKILEINRKGKLVKDLIEFAAETQSAVSIEKVNFIGVEEDESFNRLAQALTSGSKKGKKKRPSADNRQQRSRPDRPNNSNSNRGERSNTPRNVQQGENRERPQRREPGKNQPQADNMTNGGNDQNVPKENKPRHRPNNNNRRRNNNNKGKQNDSGQQTS*