ggKbase home page

SCN18_13_7_16_R1_B_scaffold_1006_20

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20_40_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: 17812..19371

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IDM4_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 32.8
  • Coverage: 546.0
  • Bit_score: 304
  • Evalue 1.20e-79
integral membrane sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 32.8
  • Coverage: 546.0
  • Bit_score: 304
  • Evalue 3.50e-80
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 31.7
  • Coverage: 549.0
  • Bit_score: 305
  • Evalue 7.90e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1560
TTGAATCGAAAGAAGTTAAAATACATTATTTTTCTTGTCTGCTTTGGGTTAATTGCCCTTATTGGCATTCAGCTGTTTCAGATTATTGAGCTCTCCAAACGGAAAAATGCCCGGATCGGAGGTTTGATTGATGTTATGGGAAAAGATGTTTCCGTTGAATACAATCAGATCAATAATAAGATTTTCGAAAATTACTTTTTAAATGACGATGCGAAGTATGCGGAAAATGTTTCCATTAAAGATACGCTGATTAATATCGGAAACAGGATTCAACCGTTTTTACTGATCACCGGAACGACTATTGATTCCGCTACTTTTTCAAAATCGGAGCTGAGGGTGGTTTTAGATGCGGAGGATATTGAGATATTAAATGAGCGCGTTAAAACCGGCGGTGGGTCCGCAGAACTGACGGTCAATCTGGATGATCAGAAAACGAACCAGTTGTTTTCACGATCATTGAAATTAAACCGGATGGTGCTGAATGATTTTCTGCTCTATAAATTTTCCAATTACAAGAACGGATTCAATCATAAAACAATAGATTCCCTGATAGTAAGCTATATTAACAATAATGAACTTCCCCAGGGATTTTATTACAAGCTGAAAGCAGGAAATACAGATCTCTTATTTGAAAAAAGATATATATACTATAAAGCCGGATTGAATGAAGAACAGTGCTTCAGGACAAATTTATTCCTTCAGGGAACAAATGGAGACTCCATTCAACTGTATGTTTCTTTTCCCGACAAGTCAGGATTTATTTTGAAAGAGATCTTTGTAAATTTATTATTGAGCGTAGGATTGATCGTTTTATTGGCAATCTCTGTCATTTTACTTATCAGAACCTTGTTTTTTCAGGAAGAATTAAACCGTTCCAAAAATGACTTTATTTCCAATATGTCACATGAGTTTAAAACGCCGATTTCCACTATTTCTCTTGCATGCCAGGCACTTGAGGACAAATCCCTTGTGAACGATGTAGAAACCATTCAGCCGTATATCTCCATTATCAGTGAAGAAAATAAAAGGCTCCAGCAGCTTATTGAAGAGATCATCCACATTTCGGAAATGAGCGCAAACGAGCTGAAAATGAGCTTTCAAAGAGAAGATCTGGTGGAGATTATGCTGGATGTAGCTGGAGAATTTTCCCCAAAAATAAGCGAGCTGAACGGAAAGCTTTTAGTAAATATACCGGAAACTGACGAGGAAATCGAAGTAATTGTTGATCGTGCGCATATTGAGAAAGCAATTAATGCGATTTTAGATAATGCCCTTAAATATTCCAGAGGAATTCCGGAAGTGGAGATCTCTTTGAAGCGCACAAGAAAAAATTCCCAAATAATTATAAAAGATAAAGGAATCGGCATTTCTAAAGACTATCTGGACAAAATTTTTGATAAATTGTACCGGATTCCGAAAGGGAATCTGCATAGTGTAAAAGGATTTGGTATTGGACTGAGCTTTGCGAAGTCCGTTTTCGATTTACATAATTGGCAGATAAAAGTAAAAAGTATCGTTAATTTTGGGACAACGGTAACAATAACCATTAAAAAATTATGA
PROTEIN sequence
Length: 520
LNRKKLKYIIFLVCFGLIALIGIQLFQIIELSKRKNARIGGLIDVMGKDVSVEYNQINNKIFENYFLNDDAKYAENVSIKDTLINIGNRIQPFLLITGTTIDSATFSKSELRVVLDAEDIEILNERVKTGGGSAELTVNLDDQKTNQLFSRSLKLNRMVLNDFLLYKFSNYKNGFNHKTIDSLIVSYINNNELPQGFYYKLKAGNTDLLFEKRYIYYKAGLNEEQCFRTNLFLQGTNGDSIQLYVSFPDKSGFILKEIFVNLLLSVGLIVLLAISVILLIRTLFFQEELNRSKNDFISNMSHEFKTPISTISLACQALEDKSLVNDVETIQPYISIISEENKRLQQLIEEIIHISEMSANELKMSFQREDLVEIMLDVAGEFSPKISELNGKLLVNIPETDEEIEVIVDRAHIEKAINAILDNALKYSRGIPEVEISLKRTRKNSQIIIKDKGIGISKDYLDKIFDKLYRIPKGNLHSVKGFGIGLSFAKSVFDLHNWQIKVKSIVNFGTTVTITIKKL*