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SCN18_13_7_16_R1_B_scaffold_815_19

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20_40_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(20209..21555)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S637_PEDSD similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 448.0
  • Bit_score: 819
  • Evalue 1.30e-234
two component, sigma54 specific, transcriptional regulator, Fis family similarity KEGG
DB: KEGG
  • Identity: 93.8
  • Coverage: 448.0
  • Bit_score: 819
  • Evalue 3.70e-235
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADY52140.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 448.0
  • Bit_score: 819
  • Evalue 1.80e-234

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1347
GTGAGCAAAGTTTTAATCATAGATGACGAAGAAAAAATAAGAACCCTGCTTTCCAAAATCATTACGTTGGAAGGGTTTGACGTGCTACAAGCAGGCGACATCAAAAGCGGTTTAAAAAAACTGGAAACAGCTGATGTTGATGCCGTGATATGCGATGTAAAACTACCAGACGGAAGCGGTGTTGAAGCCACTAAAAATATCAAAGAGAAATATCCCTCAGTAGAAATCATATTACTCACTGCCTACGGCAATATTGCAGATGGCGTTCAGGCAATGAAAAACGGAGCTTTTGATTACATTACCAAAGGCGATGACAATAACAAAATCATTCCCCTGCTCTATAAAGCAACCGAAAAAGTAACACTCTCCAAACGGGTAATGCAGTTAGAAAAGCTGTTAGGCAATAAATATTCCTTTGATAACATCATCGGAAAATCCAAAACGCTTGGTGCTTCCATTGATGCCGCCAAAAAAGTGGCAGATAGTGAAACAACCGTTTTGCTTACCGGAGAAACCGGAACGGGTAAGGAGGTTTTTGCACAAGCCATTCACAATGCGAGTAATAGGAACAAACAGAATTTTGTAGCCGTAAATTGTTCTGCGTTTAGCAAAGAATTGTTGGAAAATGAATTATTCGGGCATAAAGCAGGTGCGTTCACAGGTGCGGTAAAGGATAGTAAAGGAATTTTTGAGGAAGCAAACCACGGGACGGTTTTCTTAGATGAAATTGGTGAAATGCCTTTAGATTTACAGGCAAAGCTCTTACGGGTTTTAGAAACAGGAGAATTTCTAAAAGTAGGTGATAGTAAACCAACCAAGGTAAACGTCCGTATTATTGCTGCCACTAATAGAAATTTACAACAAGAAGTAGAGGAAGGACACTTCCGTGAAGATTTGTTTTACCGAATTGCCGTCTTTCAGATTTCACTACCCCCACTCAGAGAACGGGTTATTGATATAGAAGAACTGGCGATATTCTTTCTTCGCACATTTACAAATAAGACGAACAAAAAAATCAATACCATTTCAAAAAACTATCTCGAAGCACTGAAACAACATACGTGGAAAGGCAATATCAGAGAACTCAAAAACGTAATTGAGCGTAGCGTAATACTTACAGGTAATACAGAATTAGAAGAAGATAGTCTGCCATTGGAACTACAACGTCTTGGCACTTTAGATAACCGTGAAAAAACACTATCTGCCTTTGAACTTGCAAGCGTAGAAAAAGTTCATATTCAAAAAGTGTTGAACTATACCAATGGCAATAAAACAGAAACAGCAAAACTGCTCAATATTGCCTTAACTACTCTATACCGGAAGATTGACGAGTACCATATAAAATAA
PROTEIN sequence
Length: 449
VSKVLIIDDEEKIRTLLSKIITLEGFDVLQAGDIKSGLKKLETADVDAVICDVKLPDGSGVEATKNIKEKYPSVEIILLTAYGNIADGVQAMKNGAFDYITKGDDNNKIIPLLYKATEKVTLSKRVMQLEKLLGNKYSFDNIIGKSKTLGASIDAAKKVADSETTVLLTGETGTGKEVFAQAIHNASNRNKQNFVAVNCSAFSKELLENELFGHKAGAFTGAVKDSKGIFEEANHGTVFLDEIGEMPLDLQAKLLRVLETGEFLKVGDSKPTKVNVRIIAATNRNLQQEVEEGHFREDLFYRIAVFQISLPPLRERVIDIEELAIFFLRTFTNKTNKKINTISKNYLEALKQHTWKGNIRELKNVIERSVILTGNTELEEDSLPLELQRLGTLDNREKTLSAFELASVEKVHIQKVLNYTNGNKTETAKLLNIALTTLYRKIDEYHIK*