ggKbase home page

SCN18_13_7_16_R1_B_scaffold_1163_21

Organism: SCNpilot_BF_INOC_Flavobacteriales_40_20_40_10

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38
Location: comp(19348..20211)

Top 3 Functional Annotations

Value Algorithm Source
Isopropylmalate/homocitrate/citramalate synthase n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R1G8_OWEHD similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 285.0
  • Bit_score: 364
  • Evalue 7.40e-98
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:KGE89690.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 283.0
  • Bit_score: 374
  • Evalue 1.00e-100
isopropylmalate/homocitrate/citramalate synthase similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 285.0
  • Bit_score: 364
  • Evalue 2.10e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → SCNPILOT_SOLID2_TRIM150_Sphingobacteriales_40_586 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 864
ATGGAGAAATTGAAGCTGATTGAATGCCCCAGAGATGCAATGCAGGGGCTTTCGGAATTCATTCCGACAGAAGTAAAGATAAAGTATCAGAACGTTTTGTTGAAATGCGGATTCGATACGCTGGATTTCGGAAGCTTCGTTTCTCCCAGGGCAATTCCTCAGATGCGTGATACGGCGGATCTTTTGAAAGGTTTGGAGCTGGACCGGACAACGACCAAGTTGCTGGCCATTATCGCCAACGAAAGGGGAGCAGAAGATGCGTTACAGTTTGAAGAAATAAGCTATTTGGGATACCCTTTCTCCATTTCAGAAACGTTTCAGATCAGAAATACGAATGCAACGATTGAAGAATCCTGGTCAAGAGTGGCAAATATTGCTGAATTAACTTCTAAAAAAGGGAAGGAGCTGGTAGTTTATCTTTCCATGGGTTTCGGGAATCCTTATGGTGATCCGTGGAATGCTGAAGTGGTTTTTAAATGGGCAGAGCGTTTGAATAAAGAGCTGGGAATAAAAATATTAGCGTTGTCTGATACGATAGGAGCAGCTTCACCGGAATTAGTGTCGGATTTATTTACGAACATCATTCCGGCTTTACCGGATGTGGAATTCGGAGCGCACCTTCATGTCAACCCTGTAAATGCTGAAAAAATTATTGCGGCAGCATATAACAGTGGCTGCAGGAGATTTGACAGTGCTGTAAAAGGTTTTGGGGGTTGTCCGATGGCAGAGGATAAGCTGACGGGAAATATGCCAACCGAAATATTGATTTACTGGCTGGAAAAAAATAAAATCGACACAGGAATTGATAACTTTTTCTTTGATGAAGCGTTACAATTGAGTACAACCGTTTTTCCAATACATTAA
PROTEIN sequence
Length: 288
MEKLKLIECPRDAMQGLSEFIPTEVKIKYQNVLLKCGFDTLDFGSFVSPRAIPQMRDTADLLKGLELDRTTTKLLAIIANERGAEDALQFEEISYLGYPFSISETFQIRNTNATIEESWSRVANIAELTSKKGKELVVYLSMGFGNPYGDPWNAEVVFKWAERLNKELGIKILALSDTIGAASPELVSDLFTNIIPALPDVEFGAHLHVNPVNAEKIIAAAYNSGCRRFDSAVKGFGGCPMAEDKLTGNMPTEILIYWLEKNKIDTGIDNFFFDEALQLSTTVFPIH*