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SCN18_13_7_16_R1_B_scaffold_278_24

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(35528..36193)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XT34_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 173.0
  • Bit_score: 177
  • Evalue 7.50e-42
Uncharacterized protein {ECO:0000313|EMBL:KEQ30664.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.7
  • Coverage: 189.0
  • Bit_score: 183
  • Evalue 1.90e-43
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 173.0
  • Bit_score: 177
  • Evalue 2.10e-42

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Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 666
ATGTATTTGGAAGGTCTTTTATTTAAAGGCCAAAAAATATTAGATTCGCTATCAAAAGTATCAAAACTGTTCTGCTTGTATACCATTACTTCAAATGAAAAGGATTTGGTCAGTCTTCTTATTGAAGGTGATGAAGCGGCATTTGAAAAATTGTATCGCTTATACAGCGGGCGTTTATTAGCCTATCTCATCAAACTGTTAAAGTCAGAATACATTGCCTGTGAAGTACTGCAGGATGTATTTATTCAGGTATGGAATAACCGGCAGCATATTGATGCAGAGCAAGCTTTCCGTTCTTATTTATTTCGTATTGCTGAAAACCGCGTCTATGATGTTTTTCGTAAGGGAGCGCGTGATAAAAAATTGCGGGCAGTATTAATTCAAGCTGCTTATAAAGCTTATAACCCGGTTGAAGAAGCTGTTTGCGTGAAAGAATGGAACCAGCTTCTCCGGGAAGCCATAGATGCATTACCACCAAAGCGGCGCCAGGTTTTTCAATTGGTAAAAATGGAAGAACGTTCTTATGAAGAAGTAAGTCACATGCTTGATGTGTCAGTCTCTACAGTTAATGACCATATTGTAAAGGCAACCAAATCTATACGCGAAAATCTTGAACGATATCATATTACAGTTATTGGTATCATGTTTTTTTATTGGATCTCTTAA
PROTEIN sequence
Length: 222
MYLEGLLFKGQKILDSLSKVSKLFCLYTITSNEKDLVSLLIEGDEAAFEKLYRLYSGRLLAYLIKLLKSEYIACEVLQDVFIQVWNNRQHIDAEQAFRSYLFRIAENRVYDVFRKGARDKKLRAVLIQAAYKAYNPVEEAVCVKEWNQLLREAIDALPPKRRQVFQLVKMEERSYEEVSHMLDVSVSTVNDHIVKATKSIRENLERYHITVIGIMFFYWIS*