ggKbase home page

SCN18_13_7_16_R1_B_scaffold_279_6

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 4390..5118

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 237.0
  • Bit_score: 298
  • Evalue 4.20e-78
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 237.0
  • Bit_score: 298
  • Evalue 1.20e-78
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 236.0
  • Bit_score: 300
  • Evalue 2.00e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 729
ATGTTGCAAAGACTAAAAACCGACATACTTGAGGAGAACAATGATTTTATTGCGATAAATAAGCCTTCCGGGTTGTTATCTGTTCCCGACAGAGCCGGAAATGAGGTCTCGCTGAAAGAAATATTAAAGCGGCAGCATGGCGAGATCTACACCGTGCACCGGCTTGATAAAGATACAAGCGGCGTGATCGTATTTGCCAAAAATGCAGATGCCCATAAGTTCCTGTCGGGATTATTTGAAAGCAGGGAAGTAGAAAAATATTACAGCGGTATAGTGCATGGCATCCCCCCGCAGGAAAGCGGGTCAGTAGATGCCGCCATGATGGAACACCCGGTGAAAAAAGGGATAATGGTCACTAATAAAAAAGGAAAGCCTGCGCTCACGGACTACCGCCTGGTAGAAACATTCGGGAATTATTCAGTGATGCAATTCCGTATTCATACCGGCAGAACACACCAGATCCGTGTGCACATGAAGCATATCGGGCACCCCATAGTATGTGATGCAATATATGGTAACGGCGAGCCTGTGATGCTGTCTTCTATCAAAAAGAATTTTAATCTCTCCAAAAAAGAAGAAGAGGAAAGACCTTTATTTCACCGCCTGGCCTTACATGCCGAAAAGCTGGTCTTTACCGACCTGCAAAAACAGCAACATATTATTGAATCTCCTCTCCCTAAGGATATGAAGGCTTTTTTACAGCAGTTGCGGAAATGGAAATTCAGGTAA
PROTEIN sequence
Length: 243
MLQRLKTDILEENNDFIAINKPSGLLSVPDRAGNEVSLKEILKRQHGEIYTVHRLDKDTSGVIVFAKNADAHKFLSGLFESREVEKYYSGIVHGIPPQESGSVDAAMMEHPVKKGIMVTNKKGKPALTDYRLVETFGNYSVMQFRIHTGRTHQIRVHMKHIGHPIVCDAIYGNGEPVMLSSIKKNFNLSKKEEEERPLFHRLALHAEKLVFTDLQKQQHIIESPLPKDMKAFLQQLRKWKFR*