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SCN18_13_7_16_R1_B_scaffold_279_12

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(10480..14772)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000256|RuleBase:RU004279};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 1430.0
  • Bit_score: 2496
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7D5_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 1430.0
  • Bit_score: 2495
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 1430.0
  • Bit_score: 2495
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4293
ATGGCTATCAAAAAAGACAATCGTCCAAGGTCAAATTTTTCTAAGATCACTATCAGCCTGGCTTCTCCGGATGCCATTCTTGAAAGGTCTTATGGTGAAGTTTTGAAGCCTGAAACCATCAACTACCGTACTTACAAACCGGAAAGAGACGGTTTGTTTTGCGAGAGGATCTTTGGTCCGGTAAAAGATTATGAATGTGCCTGCGGTAAGTACAAGCGTATCCGTTACAAGGGTATTGTGTGCGACCGTTGCGGTGTGGAAGTAACAGAGAAGAAAGTGCGTCGTGAGCGCATGGGGCATATTAAACTGGTTGTACCGGTTGTGCATATCTGGTATTTTAAAAGTCTTCCCAATAAAATTGGTTACCTGCTTGGTATCAGCTCCAAGAAAATGGAAACTATCGTGTATTATGAGCGTTATGTTGTAATACAGCCGGGAATAAGAGAAGACCGCAACCTGAAAATGGGCGATCTTTTAACAGAAGAAGAATATCTTGAAATTCTGGAAAATCTTCCGAAAGATAACCAGTACCTGCCTGATGATGATCCGCAGAAGTTCATCGCGAAGATGGGCGCTGAAGCTATACAGGCAATGCTGTCGAGAATTGATCTTGACCAGTTGAGTTATGATCTGAGAAATGCTGCGGCAACTGAGACCTCTCAGCAACGTAAGGCGGATGCGCTGAAGCGTTTGAGCGTGGTAGAATCTTTCCGCGATGCGAATGGCAGGATTGAGAACCGTCCTGAATGGATGGTAATGCAATATATACCGGTAATTCCGCCGGAATTGCGCCCGCTGGTACCACTGGATGGCGGTCGCTTTGCATCTTCTGACCTGAACGATCTGTACCGTCGTGTGATCATCCGCAACAACCGCCTGAAACGTCTGCTGGAGATCAAAGCGCCTGAAGTGATCCTGCGCAACGAAAAACGTATGCTCCAGGAAGCGATAGATTCTCTCTTTGATAACTCACGTAAGTCAAACGCCGTAAAAGCAGAAGGCGGGCGTGCGTTGAAATCACTGAGCGATGTGCTGAAAGGAAAACAGGGTCGTTTCCGCCAGAACCTGTTGGGTAAACGTGTTGACTACTCCGGTCGTTCCGTAATTGTGGTTGGTCCTGAATTGAAGCTGCATGAGTGTGGGTTACCGAAAGATATGGCTGCGGAATTGTTCAAGCCATTTATCATCCGCAAGCTCATTGAAAGAGGGATAGTGAAAACGGTGAAGAGCGCAAGAAAGCTTGTTGACCGTAAAGAAGCTATTGTTTGGGATATTCTTGAAAATATATTGAAAGGGCATCCGGTGATGTTAAACCGTGCCCCGACGCTGCACCGTTTGTCTATTCAGGCCTTCCAGCCAAGGCTGGTAGAGGGCAAGGCGATACAGTTGCACCCGCTCGTATGTTCTGCGTTCAACGCCGACTTCGATGGCGACCAGATGGCGGTGCACGTTCCGTTGAGCAGCGCTGCGATTCTTGAAGCGCAGTTGCTCATGCTTTCTTCCCACAACATTCTCAACCCGCAGAATGGTACACCGATCACCCTGCCTTCGCAGGACATGGTGTTGGGATTATATTATATTTCCAAAGGGAAAAAATCAACGGAGACTGAAAAGATAAAAGGAGAAGGCAAAGCTTTTTATAATGCAGAAGAGGTGATCATTGCTTACAATGAAGGAAAAGTTGATCTGCATGCACAAATCAAGGTGAAAGCAAACGTCCGTAAAGAAAACGGAGAATTGCAAAATAAATTAATTGAAACTACTGTTGGTCGTGTAATATTCAACCAGCATGTTCCTGCGGAAGTAGGCTTTGTGAATGCATTGCTTACCAAGAAATCATTGAGGGAGATCATTGGTGATATCATCAAGATCACAAATGTTCCTAAAACAGCTAAATTCCTTGATGATATCAAGCAGCTCGGTTTCCGTACTGCCTTCCGCGGAGGTCTTTCGTTCAACATCAATGACCTTGTGATCCCGGAATTAAAGCAGGAGCTGGTAGAGTCAGCATCTGAAGAAGTGAAGGAAGTATGGGATAACTATAACATGGGGCTGATCACCAATAATGAACGTTACAACCAGATCATTGATATATGGTCGCGTGTGGATACCCGTGTTACCGAAACGCTGATCCGGGAAATGGCGACAGATAAGCAGGGCTTCAACTCTGTATATATGATGCTTGATTCCGGGGCCCGTGGTAGTAAGCAGCAGGTAAAGCAGCTTGCCGGTATCAGGGGACTGATGGCGAAGCCCCGTAAGAGCGGTTCCACAGGATCTGAGATCATTGAAAACCCGATCCTTTCCAACTTTAAAGACGGGTTGAATGTATTGGAATACTTTATCTCCACGCACGGTGCCCGTAAAGGTCTTGCCGATACGGCACTGAAAACTGCCGATGCCGGTTATCTTACCCGCCGTTTGGTAGACGTAGCCCAGGATGTGGTAATAAATGATGAAGATTGCGGAACCCTGAGAGGTATTGCCATCAGTGCGCTGAAAGACAATGAAGATATTGTAGAGCCATTGTATGACAGGATACTGGGACGTACTTCCGTTCATGACGTATATGATCCGCAGACAGACAAATTAATTATTGCTGCCGGAGAGCTTATTACTGAAGATATAGCACGCGCGATTGAAGACAGCGGTATTGAAACGGTTGAGATCCGTTCCGTGCTCACCTGCGAAAGCAAACGCGGAGTGTGTGTAAAATGCTACGGGCTTAACCTCGCTACAGGTTATGTCGCTCAAAAAGGAGATGCAGTAGGAATTATAGCAGCACAATCTATCGGTGAACCTGGTACACAGTTGACACTTCGTACCTTCCACGTGGGTGGTGTTGCCGGTTCTGCAACCGTTGACTCGCAGCTTACAGCCAAATTTGACGGTACCGTTCAGTTCGACGGACTTCGTACTGTAGCTTCGGAAAATGCCGGCGGCGAGAAGACCCAGGTTGTTATCGGCCGTACCGGGGAGCTGCGTATCATTGATGTAAAAAATGACCGCTTGCTGATCACCAACAATATTCCTTACGGATCAATCCTGATGGTAAAAGACGGCCAGCAGGTAAGCAAGGGCGATGTGATCTGCACATGGGATCCGTTCAATAATGTAGTTATTTCCGAGCAGAGCGGTGTGGTTAAGTTTGAAAGCATCATAGAAGGTGTGACCTTCCGTGAAGAAGCGGATGAGCAGACCGGCCACCGTGAGAAAGTGGTTATTGAAACAAAAGACAAGACCAAGATCCCGATGCTCACCGTAGAAGGAAAAGAGCTAAAAACATATAATCTTCCGGTAGGCTCGCATATCTCTGTGGAAGAAGGAGAAGAGGTGCGTGCCGGCGAAGTAATGGTGAAGATACCGCGTGTGTTGGGTAAGCTGCGTGATATCACGGGTGGTTTGCCGCGTGTAACAGAATTATTTGAAGCGCGTAACCCCGGCAATCCTGCTGTTGTTTCCGAAATTGACGGTGTGGTAACCTTTGGCGCTGTTAAGCGTGGTAACCGCGAGATCATTATTGAAGCGAAAGACGGTGTGGTAAAAAAATACCTTGTTCCGCTGACCCGCCAGATCCTCGTGCAGGACGGCGACTTTGTAAGGGCAGGTACGCCAATGTCTGATGGTCAGACCGCACCGGCAGATATCCTTAATATCAAAGGACCTTACGCCGTGCAGGAATATGTAGTGAACGAGATCCAGGAAGTATACAGGTTACAGGGTGTACGTATCAACGATAAGCATATTGAAGTGATCGTGAGGCAGATGATGAAGAAAGTGGAGATCGTAGAGCCGGGAGATACCAAGTTCCTCGAAGAGGATCTTGAAGACAGGTTTGAGTTTATCGAGGAGAACGACTGGATATTCGATAAGAAAGTTGTTACAGATCCGGGTGATTCTGCCAAGATGCGCGCCGGCCAGATCGTAAGTCTGCGTGAACTGAGGGAAGAGAATTCCATTCTCCGCCGCAACGACAAGAAGCTGGTTGAGTTCCGTGATGCCAATACTGCCACTTCCAAGCCGGTATTGCTGGGTATCACCAAAGCATCGCTGGGTACGCATAGCTGGATATCTGCAGCGTCCTTCCAGGAAACTACAAAAGTGTTGAGCTCAGCAGCCATCCAGGGTAAAACCGATGATATGCTCGGGCTGAAGGAAAATGTAATTACCGGTCATCCGATACCGGCAGGTACAGGGCTTCGTGAGTTTGAGAACATGATCGTAGGCAGCAAGGAAGAGTACGAACTGTTGCAAACGGCCCGTGAAGCCATGAGCTTTGACGAAGAAGAATAG
PROTEIN sequence
Length: 1431
MAIKKDNRPRSNFSKITISLASPDAILERSYGEVLKPETINYRTYKPERDGLFCERIFGPVKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIKLVVPVVHIWYFKSLPNKIGYLLGISSKKMETIVYYERYVVIQPGIREDRNLKMGDLLTEEEYLEILENLPKDNQYLPDDDPQKFIAKMGAEAIQAMLSRIDLDQLSYDLRNAAATETSQQRKADALKRLSVVESFRDANGRIENRPEWMVMQYIPVIPPELRPLVPLDGGRFASSDLNDLYRRVIIRNNRLKRLLEIKAPEVILRNEKRMLQEAIDSLFDNSRKSNAVKAEGGRALKSLSDVLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLHECGLPKDMAAELFKPFIIRKLIERGIVKTVKSARKLVDRKEAIVWDILENILKGHPVMLNRAPTLHRLSIQAFQPRLVEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSSAAILEAQLLMLSSHNILNPQNGTPITLPSQDMVLGLYYISKGKKSTETEKIKGEGKAFYNAEEVIIAYNEGKVDLHAQIKVKANVRKENGELQNKLIETTVGRVIFNQHVPAEVGFVNALLTKKSLREIIGDIIKITNVPKTAKFLDDIKQLGFRTAFRGGLSFNINDLVIPELKQELVESASEEVKEVWDNYNMGLITNNERYNQIIDIWSRVDTRVTETLIREMATDKQGFNSVYMMLDSGARGSKQQVKQLAGIRGLMAKPRKSGSTGSEIIENPILSNFKDGLNVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDVVINDEDCGTLRGIAISALKDNEDIVEPLYDRILGRTSVHDVYDPQTDKLIIAAGELITEDIARAIEDSGIETVEIRSVLTCESKRGVCVKCYGLNLATGYVAQKGDAVGIIAAQSIGEPGTQLTLRTFHVGGVAGSATVDSQLTAKFDGTVQFDGLRTVASENAGGEKTQVVIGRTGELRIIDVKNDRLLITNNIPYGSILMVKDGQQVSKGDVICTWDPFNNVVISEQSGVVKFESIIEGVTFREEADEQTGHREKVVIETKDKTKIPMLTVEGKELKTYNLPVGSHISVEEGEEVRAGEVMVKIPRVLGKLRDITGGLPRVTELFEARNPGNPAVVSEIDGVVTFGAVKRGNREIIIEAKDGVVKKYLVPLTRQILVQDGDFVRAGTPMSDGQTAPADILNIKGPYAVQEYVVNEIQEVYRLQGVRINDKHIEVIVRQMMKKVEIVEPGDTKFLEEDLEDRFEFIEENDWIFDKKVVTDPGDSAKMRAGQIVSLRELREENSILRRNDKKLVEFRDANTATSKPVLLGITKASLGTHSWISAASFQETTKVLSSAAIQGKTDDMLGLKENVITGHPIPAGTGLREFENMIVGSKEEYELLQTAREAMSFDEEE*