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SCN18_13_7_16_R1_B_scaffold_279_13

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(14872..18681)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 1269.0
  • Bit_score: 2286
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7D6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 1269.0
  • Bit_score: 2286
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 89.1
  • Coverage: 1269.0
  • Bit_score: 2286
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3810
ATGTCTTCAACAAAAGTTGCTGCAAACAGCAGGATTGATTTCGGTAAAATCAAACATTTGGCTGAAACTCCTGACTTATTAGAGATCCAGATTCAGTCGTTCAAGGAATTTTTCCAGTTGGAAACCACTCCCGACAAGCGAAATATTGAAGGGCTTTTTAAAGTGTTCAAGGAAAACTTCCCGATCACTGATACGCGGAACATATTTGTGCTTGAGTTTTTGGATTACTTTATTGATCCGCCCCGCTATAGTATTGATGAGTGTATGGAAAGGGGGTTGACTTATGCTGTTCCCCTGAAGGCAAAGCTCAGGCTGAGCTGTAATGATGAGGAGCATGTAGACTTCCAGACGATCGTTCAGGATGTGTTTTTGGGCAATATTCCTTATATGACCCCCCGCGGCACGTTCGTGATCAACGGTGCTGAGCGTGTGGTGGTTTCACAGCTGCACCGCTCCCCCGGTGTATTTTTCGGGCAATCGCTCCACCCCAACGGGACTAAGATATATTCCGCAAGGGTGATCCCGTTCAAGGGCGCCTGGATGGAGTTTGCTACCGATATCAACAATGTAATGTACGCATACATTGACCGTAAGAAGAAATTCCCGGTAACTACCCTGCTCCGTTCTATCGGTTATGAGACCGATAAGGACATTCTTGAGCTGTTTGGTATGGCCGACGAGGTAAAAGGCGATAAGAAATCCTTAACTCCCTATATCGGGAAGCGCCTCGCTGCCCGCGTATTGAGAACATGGGTAGAAGATTTCGTGGATGAAGATACCGGAGAGGTAGTATCTATTGAAAGGAACGAAGTAGTCCTGGAGCGTGATACCGTGCTTGACGAAGAGGCTGTTGACCTGATTGTGGAGATGGATGTAAAGAGCGTGTTTATCCAGAAGGAAGAAGTGAGCGGAGATTTTGCTATCATTTACAATACGCTGAACAAAGACAGCGCCAACTCCGAGCTGGAAGCTGTGCAGCATATCTACCGCCAGTTGCGCGGCGCCGATGCCCCGGATAATGAAACAGCCCGCGGCATTATTGACAAGCTGTTCTTCTCTGACAAGAGATATGACCTGGGCGAAGTAGGAAGGTATAAGATCAACCGCAAGCTCAACCTGCACCAGCCGCTGGATCAGAAAACGCTTACAAAAGAGGATATTATTGAGATCATTAAATACCTGGTGAGGCTTACTAATGCCAAAGCGGAAATTGATGATATAGATCACCTGAGCAACCGCCGTGTACGCACAGTGGGTGAGCAGTTGTTTGCACAGTTTGGCGTTGGTCTGGCACGTATGGCCAGAACCATCCGTGAAAGAATGAACGTGCGCGACAACGAGGTATTTACCCCGGTAGACCTTATCAATGCAAGGACACTCTCTTCTGTGATCAACTCCTTCTTTGGAACTTCGCAGTTGTCGCAGTTCCTTGACCAGACAAACCCGCTGAGTGAGATCACCCACAAGCGTCGTATTTCCGCGCTCGGGCCCGGTGGTCTGAGCCGCGAACGTGCCGGCTTTGAGGTGCGCGACGTGCATTACTCCCACTATGGCCGTTTATGTACTATTGAAACTCCTGAAGGTCCGAACATTGGTCTGATATCCACGCTTTGCGTGCATGCCAAGATCAACGAAATGGGCTTTATAGAAACGCCTTACCGGAAAGTGGAACATGGGAAGGTGAATATGAAAAAGCTGTCTTACCTGAGCGCTGAAGAAGAGGATGAAGCCAAGATCGCGCAGGCCAACGCCCCGCTGGATACCAATGGCGCGTTTGTGGAAGAACTGGTAAGATCGCGGCAGACAGGTGATTTCCCGATACTGGAAAGAACAGAAGTAGAATATATGGATGTGGCGCCCAACCAGATCGTGGGGCTGAGCGCATCACTGATCCCGTTCCTTGAGCATGACGATGCCAACCGTGCGCTGATGGGATCAAACATGCAACGCCAGGCTGTTCCTTTGATCGTGCCGCAGGCGCCGTTTGTAGGCACCGGTCTTGAAGGAAAAGCGGCCCGTGATGCCCGTATACAGATACATGCAGACGGCGATGGCGTGATTGAATTTGTGGATGCCAACGAGATCCATGTGCGCTACGAAAGAGATGAAGCGCAAAAGCTGGTGAGCTTTGAAGATGACCTCAAGATATACAAGCTTACCAAGTTCATGAAAACGAACCAGGAAACCTGTATCAACCTGCGTCCCGCCGTGAAGAAAGGACAGCGGGTGAAGAACGGAGACTTTCTTACCGAAGGATATGCAACCAAAGATGGCGAGCTGGCGCTCGGGCGTAACCTTAAAGTGGCGTTCATGCCCTGGAAAGGATACAACTTTGAAGATGCGATCGTGATCAGCGAAAAGGTTGCCCGCGAAGATCTTTTTACTTCTATTCATATTTCAGAATACGAATTGGAAGTACGTGATACAAAACTGGGTGAAGAAGAGCTGACCCCCGATATTCCTAATGTGTCTGAAGAAGCTACCAAAGATCTTGATCAGAATGGTATCATCCGTATAGGTGCGCAGGTTAAGGAAGGCGATATCATCATCGGTAAGATCACTCCCAAAGGAGAGAGCGATCCTACCCCCGAAGAAAAACTGTTGCGTGCCATCTTTGGTGATAAAGCCGGGGATGCGAAAGACGCTTCGCTGAAAGCGCCGAGCGGAACAGAAGGTGTGGTGATCGGTAAAAAACTTTTCCAGCGCGCCAAAAAAGACAAGAATGCCAAAGTGCGTGAAAAAGCCGCTATTGATAAACTGGAAAAGATACACGAGCAGAATGAAAAAGAACTGCTTGATGTGCTGATCGGCAAGCTGCAGGTACTGCTGAAAGACAAAACTTCATCAGGCGTTACCAATAACTTTGGTGAAATGCAGATCGGCAGGAGCGCAAAGTTCAATGCTAAAAATCTTGCTGCATTAGATTACCAGAATATCAATCCTTTGGGATGGACCGGCGATGAACACATAGATCACCAGATCAATATTCTGCTGCACAACTATAATATCAAATACAACGAGGAGCTTGGCCGCTACAAAAGAGAGAAGTTCAATATCTCAATAGGTGATGAGCTGCCTGCCGGTGTATTGAAGCTTGCCAAAGTATACCTTGCGGTAAAGCGTAAGCTGAAAGTAGGTGATAAGATGGCGGGTCGCCACGGGAACAAAGGTATTGTAGCCAAGATCGTACGTGCGGAAGATATGCCTTTCCTTGAAGACGGAACGCCTGTTGATATTGTGCTGAACCCGCTGGGGGTACCAAGCCGTATGAACCTGGGTCAGATCTATGAAACTGTATTGGGCTGGGCTGCGGAAAAGCTGGGTGTGAAATTCGCCACGCCGATCTTCGATGGTGCTTCTACAGAAGAAATTGCCGATTATATCAATAAAGCAGGATTGCCTTCATTCGGTCACACTTATCTCCATGATGGGGAGACCGGTGAGCGGTTTGACCAGAAAGCTACCGTGGGTATCATTTACATGATCAAGCTGCACCACATGGTGGATGATAAGATGCACGCACGTTCTATCGGGCCGTACAGCTTAATTACACAGCAGCCGCTGGGTGGTAAAGCACAGTTTGGTGGTCAGCGTTTTGGTGAAATGGAGGTGTGGGCGCTCGAAGCTTACGGTGCATCTAACATCCTGCAGGAATTATTAACGCTTAAATCAGATGATATCATCGGTCGCGCCAAGACTTATGAATCAATTGTAAAAGGCGATAATATTCCAAGAGCCGGATTACCGGAATCCTTTAATGTATTGGTGCATGAGTTAAGAGGATTGGGATTAGAGCTGAAGTTTGAATAA
PROTEIN sequence
Length: 1270
MSSTKVAANSRIDFGKIKHLAETPDLLEIQIQSFKEFFQLETTPDKRNIEGLFKVFKENFPITDTRNIFVLEFLDYFIDPPRYSIDECMERGLTYAVPLKAKLRLSCNDEEHVDFQTIVQDVFLGNIPYMTPRGTFVINGAERVVVSQLHRSPGVFFGQSLHPNGTKIYSARVIPFKGAWMEFATDINNVMYAYIDRKKKFPVTTLLRSIGYETDKDILELFGMADEVKGDKKSLTPYIGKRLAARVLRTWVEDFVDEDTGEVVSIERNEVVLERDTVLDEEAVDLIVEMDVKSVFIQKEEVSGDFAIIYNTLNKDSANSELEAVQHIYRQLRGADAPDNETARGIIDKLFFSDKRYDLGEVGRYKINRKLNLHQPLDQKTLTKEDIIEIIKYLVRLTNAKAEIDDIDHLSNRRVRTVGEQLFAQFGVGLARMARTIRERMNVRDNEVFTPVDLINARTLSSVINSFFGTSQLSQFLDQTNPLSEITHKRRISALGPGGLSRERAGFEVRDVHYSHYGRLCTIETPEGPNIGLISTLCVHAKINEMGFIETPYRKVEHGKVNMKKLSYLSAEEEDEAKIAQANAPLDTNGAFVEELVRSRQTGDFPILERTEVEYMDVAPNQIVGLSASLIPFLEHDDANRALMGSNMQRQAVPLIVPQAPFVGTGLEGKAARDARIQIHADGDGVIEFVDANEIHVRYERDEAQKLVSFEDDLKIYKLTKFMKTNQETCINLRPAVKKGQRVKNGDFLTEGYATKDGELALGRNLKVAFMPWKGYNFEDAIVISEKVAREDLFTSIHISEYELEVRDTKLGEEELTPDIPNVSEEATKDLDQNGIIRIGAQVKEGDIIIGKITPKGESDPTPEEKLLRAIFGDKAGDAKDASLKAPSGTEGVVIGKKLFQRAKKDKNAKVREKAAIDKLEKIHEQNEKELLDVLIGKLQVLLKDKTSSGVTNNFGEMQIGRSAKFNAKNLAALDYQNINPLGWTGDEHIDHQINILLHNYNIKYNEELGRYKREKFNISIGDELPAGVLKLAKVYLAVKRKLKVGDKMAGRHGNKGIVAKIVRAEDMPFLEDGTPVDIVLNPLGVPSRMNLGQIYETVLGWAAEKLGVKFATPIFDGASTEEIADYINKAGLPSFGHTYLHDGETGERFDQKATVGIIYMIKLHHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGASNILQELLTLKSDDIIGRAKTYESIVKGDNIPRAGLPESFNVLVHELRGLGLELKFE*