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SCN18_13_7_16_R1_B_scaffold_238_27

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 37014..37676

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YGF9_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 208.0
  • Bit_score: 177
  • Evalue 7.50e-42
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EHQ24511.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 208.0
  • Bit_score: 177
  • Evalue 1.00e-41
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 172.0
  • Bit_score: 122
  • Evalue 1.40e-25

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 663
ATGCTGCCCGTTCGCAGAAGCAGGGATTTACTAACGCTTATGTCAACAAAAGCAAGCCATACGAATATATGGGAGCGGCTCCGGGAAGGCAATAAAGATGCTTTGCTTTCCCTCTACAATGAGCATTATATCGGCTTGATGAACTACGGGATAAAGCTTACCAATAAAAGAGATATCACCAGGGATGCCATCACCCAGGTTTTGCTCCGGCTGTGGGATAACCGTTCCAGGCTGCCGGAAGTAAATAATGTACGATCTTACCTTCTCACCACTTTGCGCAGGGAACTGATGGCAGAAGTGAAAATGGAAAACATACGCCACACCAGGAACCAGGAAGCCTGTCAGCTTATCCCTACAGAGGAAAAGTCGTACGAGGAGCTGATCATTCAATGGCAGCACAACAATGAGCTGAGACTAAAGCTGGCAAAGGCTTTCAACACATTGACCGCAAGAGAAAAAGAGCTGCTGCAATTAAAGTTCTTTGAAGATCTTGACTATAAGGAAATTGCCGAAAGGTGTAATATTTCCAAAAGAACGGCTTATAATATCATTCATGCAGCCCTCAAATCGCTGCGAACCATTCTCATCGCCACTCCCAGGGAGAACAGTATCCCCGATCATATCCTGCTGAGCTGTATTTTTCTTATTTTAATACAAGCTTGA
PROTEIN sequence
Length: 221
MLPVRRSRDLLTLMSTKASHTNIWERLREGNKDALLSLYNEHYIGLMNYGIKLTNKRDITRDAITQVLLRLWDNRSRLPEVNNVRSYLLTTLRRELMAEVKMENIRHTRNQEACQLIPTEEKSYEELIIQWQHNNELRLKLAKAFNTLTAREKELLQLKFFEDLDYKEIAERCNISKRTAYNIIHAALKSLRTILIATPRENSIPDHILLSCIFLILIQA*