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SCN18_13_7_16_R1_B_scaffold_361_24

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(26200..26775)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI67_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 188.0
  • Bit_score: 236
  • Evalue 1.50e-59
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KIC93361.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 187.0
  • Bit_score: 250
  • Evalue 1.40e-63
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 188.0
  • Bit_score: 236
  • Evalue 4.40e-60

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 576
GTGAGCAATAACCAGAAGGAACAAGAACTGATAAAAGGGCTGGCACTCGATGATAAGACCGCTATTGAAGCTATTTATAAGGATAATTACGGACTGATACAAAACCTGGTTATCAACAACAGCGGCTCGGAAGATGATGCGAAGGATATATTCCAGGAAGCGCTGATCGTATTGTACGAGAAGTCAAAATCGGGGGTTTTTGAGCTCAATTGCCAGATCAGGACCTATATATATGCCGTGAGCAAACGCCTGTGGCTTAAAAGGCTTCAAAACAGGAGCCGGTATGATCTTATAGAGAACGGGGCAGAAGAAGCCGTAACTGTGGAAGATGATATTGCCCTGCACGAAAAGAGGAACAGCCAGTTTGGGATGATGGAGCATGCCCTGGCGATGATAGGAGAGCCCTGCAAGAGCCTGCTTGAAGCGTACTATATCGGGAAACAGAATATGCAGGAGATCGCTGACGCTTTTGGGTATACCAATGCCGACAACGCCAAGAACCAAAAGTACAAGTGCCTTATGCGGTTAAGAAAATTGTTTTTTGCACAATATAAAAGTGATAATACAAATGGATAA
PROTEIN sequence
Length: 192
VSNNQKEQELIKGLALDDKTAIEAIYKDNYGLIQNLVINNSGSEDDAKDIFQEALIVLYEKSKSGVFELNCQIRTYIYAVSKRLWLKRLQNRSRYDLIENGAEEAVTVEDDIALHEKRNSQFGMMEHALAMIGEPCKSLLEAYYIGKQNMQEIADAFGYTNADNAKNQKYKCLMRLRKLFFAQYKSDNTNG*