ggKbase home page

SCN18_13_7_16_R1_B_scaffold_374_25

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(38762..39988)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7R4_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 416.0
  • Bit_score: 288
  • Evalue 7.30e-75
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 416.0
  • Bit_score: 288
  • Evalue 2.10e-75
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW03358.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 416.0
  • Bit_score: 288
  • Evalue 1.00e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1227
ATGATTGATCTCAAAATTATCAGGGAGTTACTGGATCGCTATAGTGCAGGAACAGCCTTACCCCATGAGCAGGAGTTGATAGAACGCTGGTTGCGGGAAAATGAGCTTCCGGACAATGAATGGGCGCGACTGGATCCGGAGAACCGCGAGCATTGGATAAAAGAGATGGGGGAAGAGCTTTTGAAGCATGCCAGTGAAAGAACCGGATCGCCGGATGCTACAATAAGGCAGGGACTTCCCTGGCACCGGAGGTTTTATTTTCATCTTGCCGCGGCATCGGTAATTATGCTGATTGCAACAGGCAGTTGGTACTTTATGAGGGGAATGCGGAAGGATATACCGGTTGCAAAAAAAACTGAAGAGGTTATTAAGAATGACGTAGCTCCGGGTAGTAATAAGGCCGTGTTGACATTGGCGGACGGGGGAACAGTAGTGCTGGATGATGCTAATAACGGAGTGCTGACCAGCCAGGGAAGCACCGAAGTACGTAAACGGGGCAATGAGCTTGTATATAGCCAGGAGCAGAACAGCAGCGCTATCCATATACCTGTTTTCAATACACTCACCACGCCACGGGGCGGGCAATACAACCTGGTGCTTCCTGATGGTAGTCACGTATGGCTCAATGCGGCATCTACCGTCAAATATCCGGTTGCATTTGTCGGCGACAGCAGGATAGTAGAGGTAAAGGGTGAAGTGTATTTTGAAGTGGCGTCTTTTATCCGTTCGGGTAAAAAAGTTCCATTCAGGGTGAAAGTGCTGTCAGAGAAGAATGAGCAGAAAAGCCTGATTGAAGTGATGGGCACGCATTTTAATATCAATGCATACGATGAGGAAGCGAGCGTGAATACCACTCTGCTCGAGGGTAAAGTAAAAGTAAGTTCCGGCATGGAAAGTCATACAGACTTTGCAGTACTGAAGCCTGGTCAGCAGGCGCAGGTCAGCAACAGGGACGGGGCGATTAAGATCGTAAAGGATGCCGACATTGATGAGGCTGTAGCCTGGAAGAACGGTTTGTTCATGATGAGCGGAGCTGATATATCAGTGGTGCTCAGAAAGCTGGCAAGATGGTATGATGTGGATATCATTTATGAAAAAGGGATGCCGAAAGGTAAGATCACGGGCGACATACCACGTAATATGCTGCTGTCTGAAGTATTAAAAGTAATGAAGCTCAGTGGTATACAATGCAGGATAGAAGGAAAGAAATTAATTGTAGGATCATAA
PROTEIN sequence
Length: 409
MIDLKIIRELLDRYSAGTALPHEQELIERWLRENELPDNEWARLDPENREHWIKEMGEELLKHASERTGSPDATIRQGLPWHRRFYFHLAAASVIMLIATGSWYFMRGMRKDIPVAKKTEEVIKNDVAPGSNKAVLTLADGGTVVLDDANNGVLTSQGSTEVRKRGNELVYSQEQNSSAIHIPVFNTLTTPRGGQYNLVLPDGSHVWLNAASTVKYPVAFVGDSRIVEVKGEVYFEVASFIRSGKKVPFRVKVLSEKNEQKSLIEVMGTHFNINAYDEEASVNTTLLEGKVKVSSGMESHTDFAVLKPGQQAQVSNRDGAIKIVKDADIDEAVAWKNGLFMMSGADISVVLRKLARWYDVDIIYEKGMPKGKITGDIPRNMLLSEVLKVMKLSGIQCRIEGKKLIVGS*