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SCN18_13_7_16_R1_B_scaffold_380_10

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(11461..12021)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NNB2_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 179.0
  • Bit_score: 263
  • Evalue 1.10e-67
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 179.0
  • Bit_score: 262
  • Evalue 5.50e-68
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW00955.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 179.0
  • Bit_score: 262
  • Evalue 2.70e-67

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGTCTATACAAAGCAACCATACCCTGGCCGAGAGCGACTTAATTAAAGGCTGTCTTGCCGGCGACCGGCGTATGCAGGAAGCTTTGTATCAACGGTTTTCTCCAAAAATGTATGCTGTTTGCCTCCGGTATTCAAGCAATGCAGATGATTCGCAGGATATATTGCAGGATGGATTTGTAAAAGTTTTCAGGAACCTGCACATGTTCAGGAACGAAGGATCTTTTGAAGGGTGGCTGAGACGGATCTTTGTCAACACGGCAATAGAACATTACCGCCGCCAGGTGAACATGTATCAGGTAACTGAAGCGCACGAAAACACTTTGGAGACCAAAGAGACATCAGCCTTCGATTCGCTGAGCATGAAAGACCTGGTAAAGCTGATACAACAGCTATCGCCGGGGTACAGGACAGTATTTAATCTTTATGTAATTGAAGGCTATTCACATAAGGAAATTGCGGAAATGATAGGCATTAGTGAAGGCACCAGCAAGTCGCAACTCGCAAGAGCAAAAAGTATTTTACAAAATATTATCCGTACCAAGAAAACACTATCCGAATAA
PROTEIN sequence
Length: 187
MSIQSNHTLAESDLIKGCLAGDRRMQEALYQRFSPKMYAVCLRYSSNADDSQDILQDGFVKVFRNLHMFRNEGSFEGWLRRIFVNTAIEHYRRQVNMYQVTEAHENTLETKETSAFDSLSMKDLVKLIQQLSPGYRTVFNLYVIEGYSHKEIAEMIGISEGTSKSQLARAKSILQNIIRTKKTLSE*