ggKbase home page

SCN18_13_7_16_R1_B_scaffold_516_24

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 39468..39818

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-54 {ECO:0000313|EMBL:KEY18688.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.4
  • Coverage: 96.0
  • Bit_score: 54
  • Evalue 7.10e-05

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 351
ATGAAATTTCGTATTGAATCTGCAGGGCATAAGCTTAGCCCGTCTTTAAAAGAATTTGCTACGCTTAAATTAAGTAACCTCGGCAGGTATTATAAAGATATCCAGGAGATAGAAGTGACGTTGATAAATGAAACGAAAGGCGCTAAGGAAGTCGTTAACTGTACGCTCAATATAAGAGTACCGGGCAAAGATGAGTATATCAAAGCTTCTTCAGCTATTTTTGAAGATGCTATACTTAAAGCTGCCGAAGGTGCTAAAAGAAGGCTTCGTATCCGCAAAACGCAGTTGCAGATCGCCAGGAAAAAGAAAACGCCCAACAGAGAAGTTTCTGCTGAAAAAGCATTGAAGTAA
PROTEIN sequence
Length: 117
MKFRIESAGHKLSPSLKEFATLKLSNLGRYYKDIQEIEVTLINETKGAKEVVNCTLNIRVPGKDEYIKASSAIFEDAILKAAEGAKRRLRIRKTQLQIARKKKTPNREVSAEKALK*