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SCN18_13_7_16_R1_B_scaffold_428_7

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 6533..7126

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6FFBA similarity UNIREF
DB: UNIREF100
  • Identity: 35.4
  • Coverage: 178.0
  • Bit_score: 132
  • Evalue 3.20e-28
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EDM38002.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.9
  • Coverage: 186.0
  • Bit_score: 131
  • Evalue 1.30e-27
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 168.0
  • Bit_score: 129
  • Evalue 5.90e-28

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Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 594
ATGTCATGCCGGGATCCATATGAGATTATAACAGCATGTTTTCAGTCCCTTGCCAAAGGCGACCTTGGTGCGTTTGAGGCATTTTTTGAAGCCTATAAGAAAAGAGTATTTGGCGTAGCGCTTAAAATGCTGAAGTCTTCTGTGGAAGCCGAGGATATCGTGCAGGAAGTATTTCTTTCCATCTGGCAGTCAAGAGCAAGATTAGACAAGATCAACGACCCGGAAGCCTATTTGTTTACCATTACCCATAATGCCATTTTTACCCGTTTAAAAAAAGCATCCCGCGATCAGAAGCTTTTAAATACGGTCTTACATCATATCGCGCTGAAACAAAATATCACTGAAGAAACCATTGCGGCGCATGAAACGGACAAACTGATCAGCGAAACCATACAGCAGCTTCCGCCACAACAACGGACAGTTTACGAATTAAGCAAGCTGGAAGGATTAAGCTATAACGAGATCGCCGAACGGATGCATCTCTCCCCCAATACGGTACGCAATCACCTGGCAGAGTCTATGAAAACGATCCGGATAGTTTTAAAAAAGTGGTCTGTATTCATCGTCGCTGCTACAGGATTGCTGCTTAAATAA
PROTEIN sequence
Length: 198
MSCRDPYEIITACFQSLAKGDLGAFEAFFEAYKKRVFGVALKMLKSSVEAEDIVQEVFLSIWQSRARLDKINDPEAYLFTITHNAIFTRLKKASRDQKLLNTVLHHIALKQNITEETIAAHETDKLISETIQQLPPQQRTVYELSKLEGLSYNEIAERMHLSPNTVRNHLAESMKTIRIVLKKWSVFIVAATGLLLK*