ggKbase home page

SCN18_13_7_16_R1_B_scaffold_569_10

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(9881..10948)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 345.0
  • Bit_score: 534
  • Evalue 9.30e-149
Pseudouridine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB35_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 71.3
  • Coverage: 345.0
  • Bit_score: 534
  • Evalue 6.60e-149
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 345.0
  • Bit_score: 534
  • Evalue 1.90e-149

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1068
ATGCAATCCACTACTGAAGACAGCGAACTGGAACTGGAGAATGGCGACGGCGAAGAAGAGCGGTATGAGCGCATGTCCTTTACCGTAGACAAGGGGCAGGAACCTTTGCGCATTGACAAGTTCCTCATCAACCGCATAGAAGGTGGCACCCGCAATAAGCTCCAGCAGGCTATAGAAAAGGGATTTGTTATTGTGAACGGTCAGGCTGTTAAATCCAACTACAAAGTAAAGCCGGGAGATGCGGTAATGCTTTATTCCGATACAGCGCCTGATGCCACCGAGATCATTCCTGAAGAGCTACCGCTCAATATAGTATATGAAGATGATGATATCATGGTGATCAACAAGCCTGCCGGTATGGTGGTGCACCCGGGCTGCGGCAATTACAGCGGCACGGTAGTGAACGGCATGGCATGGTACCTGCAACAGCAGCATCCTGAGCTTTCAGAAGCTGCTCTTCCCCGTTTTGGGCTGGTGCACAGGATTGATAAGAATACCAGCGGGCTGCTGGTGCTTGCCAAAAACGAAAAGGCTTCGCTGGGACTGGCATCGCAGTTTGCAGCGCATACGGTGCACCGGAGGTATATTGCCTTGGTTTGGGGCGATTTTGAAGAAGATACCGGCACCATCTCGGCACATATCGGCCGGCACCAGCGGTTCCGCAAAATAATGGACGCCTATCCGGAAGGCGATCATGGCAAAGACGCTGTAACGCATTATACTGTGTTGGAGCGTTTTGGATATGTAAGCCTTGTGGAATGCCGCCTGGAGACAGGGCGCACCCACCAGATCAGGGTGCACATGAAGCATATTGGTCATCCCCTCTTCAATGATGAAACCTATGGTGGCGACAGGATCGTAAAAGGCACTGTTTTTACCAAATACAGACAGTTCGTTGAAAATTGTTTTGAACTGTGTCCCCGCCATGCCCTGCACGCTAAAACACTGGGCTTTATACATCCTTTAACAAAAAAGCCGATGCAGTTTGACAGTGAGCTCCCGGAAGATATGCGGGAAGTGATAGAAAAATGGAGAAGGTATGTGAATGCAAGGGGGATGGAGTTGTAG
PROTEIN sequence
Length: 356
MQSTTEDSELELENGDGEEERYERMSFTVDKGQEPLRIDKFLINRIEGGTRNKLQQAIEKGFVIVNGQAVKSNYKVKPGDAVMLYSDTAPDATEIIPEELPLNIVYEDDDIMVINKPAGMVVHPGCGNYSGTVVNGMAWYLQQQHPELSEAALPRFGLVHRIDKNTSGLLVLAKNEKASLGLASQFAAHTVHRRYIALVWGDFEEDTGTISAHIGRHQRFRKIMDAYPEGDHGKDAVTHYTVLERFGYVSLVECRLETGRTHQIRVHMKHIGHPLFNDETYGGDRIVKGTVFTKYRQFVENCFELCPRHALHAKTLGFIHPLTKKPMQFDSELPEDMREVIEKWRRYVNARGMEL*