ggKbase home page

SCN18_13_7_16_R1_B_scaffold_750_20

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(21192..22784)

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDB6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 530.0
  • Bit_score: 897
  • Evalue 3.40e-258
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 529.0
  • Bit_score: 901
  • Evalue 5.70e-259
peptide chain release factor 3 (bRF-3) similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 530.0
  • Bit_score: 897
  • Evalue 9.70e-259

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1593
ATGAAATATACAGCAGAGATCAGCAGGCGGAAGACTTTCGCTATCATTTCGCACCCCGATGCAGGTAAAACCACCCTGACGGAAAAGCTATTGCTTTTTGGAGGCGCCATTCAAACCGCAGGCGCTGTTAAAAGCAATAAGATAAAGAAACATGCTACCAGCGACTTCATGGAAATTGAAAAGCAGCGTGGTATTTCCGTGGCCACCAGCGTAATGACTTTTGAATATAAAGATAACCTGATCAACCTGCTTGATACACCCGGTCACAAAGATTTTGCAGAAGATACTTACCGTACGCTCACCGCTGTGGACAGTGTGATACTGGTAATTGATAGTGTGAATGGAGTGGAGGAGCAGACCCGCAGGCTCATGGAAGTATGCCGCATGCGCGATACACCGGTCATTGTTTTTATCAATAAAATGGACCGCGATGGTAAAATGCCGTTCGATCTGCTGGAAGAAATAGAAAAAGAATTGGGTATCCTGCTCCATCCTATGACCTGGCCAATCAACAATGGGAAAGATTTTAAGGGGGTGTATAATCTTCATGATAAAAATCTCCTTTTATTTGCGGCGCATACCAAGGCTAATGATGAAGATGTGGTGCATATTACCAACCTGACAGATGCAAGCCTGGTGAGCAGGGTAGGGGATCGTGATGCTGCACAGCTGAGAGAAGATGTAGAGCTAATAGATGGAGTATACGGGGAACTGGATGTGGATGCCTACCTGCACGGGAAAACAGCCCCGGTATTTTTTGGAAGTGCAGTGAACAACTTTGGTGTGAAGGAGATGCTGGATACTTTCATACGGATCGCTCCTTCGCCGTTGTGCCGGCCTACGTCCAATGGCGAAGTTTGTCCCGATGAGGATAAATTCAGCGGGTTTGTATTTAAGATACATGCCAATCTTGATCCCAAGCACAGGGACCGAATTGCTTTTTTGAGGGTTTGCTCGGGCAGGTTTGAGCGCAATAAATATTATCATCACGTGCGCCTGGATAAAGATATCCGTTTCAGCAACCCTTATTCATTCCTTGCACGGCAGAAAGATGTGATAGAGGAGGCTTATCCCGGTGATGTGGTAGGCTTGTTTGATACCGGCAATTTTAAGATAGGGGATACGCTTACGGAAGGGGCGGACTTCTATTTTACGGGTATCCCCAGTTTCTCACCGGAATTGTTTAAAGAGGTGATAAACAAGGACCCGATGAAGACCAAGCAACTCGAAAAAGGCCTGTTGCAGCTTACCGATGAAGGGGTGGCGCAATTATTTACCCAACATGGCGGCAACAGGAAAATTATCGGTTGTGTGGGAGACCTTCAGTTTGAAGTAATTCAATACCGGCTGCTGAATGAATACGGCGCTTCCCTTCAGTTCAATACATTGCCATTTTATAAAGCCTGCTGGATCACATCAAACGACAAAAAGAAACTGGATGATTTCATCCGTTTCAAAACAGGGAATGTGGTAATGGATAAGGACGGGCATCTTGTATATCTTGCCCAGAGTGAGTGGTTCCTGAATACCGAGATCGCCAATAACCCGGATATCACTTTTCATTTCACAAGCGAAATACATAAAGCGGGGTAA
PROTEIN sequence
Length: 531
MKYTAEISRRKTFAIISHPDAGKTTLTEKLLLFGGAIQTAGAVKSNKIKKHATSDFMEIEKQRGISVATSVMTFEYKDNLINLLDTPGHKDFAEDTYRTLTAVDSVILVIDSVNGVEEQTRRLMEVCRMRDTPVIVFINKMDRDGKMPFDLLEEIEKELGILLHPMTWPINNGKDFKGVYNLHDKNLLLFAAHTKANDEDVVHITNLTDASLVSRVGDRDAAQLREDVELIDGVYGELDVDAYLHGKTAPVFFGSAVNNFGVKEMLDTFIRIAPSPLCRPTSNGEVCPDEDKFSGFVFKIHANLDPKHRDRIAFLRVCSGRFERNKYYHHVRLDKDIRFSNPYSFLARQKDVIEEAYPGDVVGLFDTGNFKIGDTLTEGADFYFTGIPSFSPELFKEVINKDPMKTKQLEKGLLQLTDEGVAQLFTQHGGNRKIIGCVGDLQFEVIQYRLLNEYGASLQFNTLPFYKACWITSNDKKKLDDFIRFKTGNVVMDKDGHLVYLAQSEWFLNTEIANNPDITFHFTSEIHKAG*