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SCN18_13_7_16_R1_B_scaffold_906_20

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 22034..22597

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VY21_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 185.0
  • Bit_score: 134
  • Evalue 8.10e-29
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 185.0
  • Bit_score: 134
  • Evalue 2.30e-29
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT96922.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 185.0
  • Bit_score: 134
  • Evalue 1.10e-28

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Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 564
ATGTCAACAGATACGGTTTTGTGGCTTAATTTCAGGAAGGGAGATAAGCAGGCTTTTGCCGCGTTATATCACAGGTATTGTAGTATAATGACCAATATATGCCTGCGCATATCACCCGATAGTGCGATCATAAAAGACTGCATTCATGATCTTTTTGTGGAAATGTGGAAGAACAGGACCCGGCTGGCTTTACCCGTTTCCGTAAAAGCCTACCTTGTGCGTTCTGTTCAAAGGAAAATTATAAGACAACTGAAGCGGAGAAGACTGGATCTGTATGCCTTTCCTGCCGAAGCGCTGCATGAGGTCGGTACGGTATCATGCGTGGAGAAAGCAATCATTGCCGAACAGTTGCGGCAGGAACAGCAGGAAAATATCAGGCGGGCTATCCGGGTATTGACACGGCGGCAGCAGGAAGCTGTGTACCTGAAATTTTATGCTGATCTCAGCTATCCTGAAATAGCGGGGAAAATGTGTATCAGCACAGATGCTATCTACAACCTTATATCAAAGGCGATAGGAAATATGCAGGAAACATTTTCTAAAACGAATTTTCCAACATTATAA
PROTEIN sequence
Length: 188
MSTDTVLWLNFRKGDKQAFAALYHRYCSIMTNICLRISPDSAIIKDCIHDLFVEMWKNRTRLALPVSVKAYLVRSVQRKIIRQLKRRRLDLYAFPAEALHEVGTVSCVEKAIIAEQLRQEQQENIRRAIRVLTRRQQEAVYLKFYADLSYPEIAGKMCISTDAIYNLISKAIGNMQETFSKTNFPTL*