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SCN18_13_7_16_R1_B_scaffold_926_16

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 12122..12706

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EL17_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 43.5
  • Coverage: 191.0
  • Bit_score: 147
  • Evalue 9.50e-33
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 191.0
  • Bit_score: 147
  • Evalue 2.70e-33
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEI51243.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 191.0
  • Bit_score: 147
  • Evalue 1.30e-32

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGAGAAAAAATGATACAGAAGAAGGGCTGCTTTGGTCCCAGTTTAAAAAAGGAGACCGGCAAAGCTTTTCCCTGATCTATCAGCAGAACATTGCTGCATTAATTAATTATGGTCTAAAAATATGTGACGATACCACGATACTGAGAGACACAATCCAGGATCTTTTTGTGGACTTGTGGAATTCCCGTCTTAATCTTTCGGATGTAGATTCAATTAAGTTCTATTTATTTAAAGCCCTGCGTTTTAAATTAATAAGGACAGGGAAAAGGAAGGTTGTTTCAGGTGACCTTTCCGCGTTCCTGCTAAAAAAAGAAAACAATACTGATGCTTCCATTGAAGACAAGATCATTATTGAAGAAGGATGGGCATTTTTAAGCAAGACTTTACAAAAGGCTGTTGCCTGCCTTACCCTGAGGCAAAGAGAAGCCATAGTATTGAGGTTTTACCATGGCTTTACCCACGAACAAATTGCTGAGCTAATGCAATTAAGCTATCAATCGGTCAGCAATTTATTATATATTGCTATAGAGAGGATGCGGGATATACTTAAAGCTCCGCTATTAATGCAGGAACAGACGCGCTAA
PROTEIN sequence
Length: 195
MRKNDTEEGLLWSQFKKGDRQSFSLIYQQNIAALINYGLKICDDTTILRDTIQDLFVDLWNSRLNLSDVDSIKFYLFKALRFKLIRTGKRKVVSGDLSAFLLKKENNTDASIEDKIIIEEGWAFLSKTLQKAVACLTLRQREAIVLRFYHGFTHEQIAELMQLSYQSVSNLLYIAIERMRDILKAPLLMQEQTR*