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SCN18_13_7_16_R1_B_scaffold_874_3

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(1332..1892)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NL78_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 179.0
  • Bit_score: 137
  • Evalue 9.50e-30
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:KIC92032.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 176.0
  • Bit_score: 148
  • Evalue 5.80e-33
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 178.0
  • Bit_score: 146
  • Evalue 4.40e-33

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Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGCAGGCAGAAAAACCAAACATACGGGATTTGTTTTTTCGCATGGCCTCATCTGACGATGAAACTGCATTATGGGAACTGCATACAGAATATTTTCCCCGCCTGTTCAGATTTGCCTTTGCCTTTATCGGTAATAAAGAAACTACAGAAGAGGTTGTTAATGATACATTCCTGGATCTATGGCAAAAACGCCATCTCCTTCATAATGTATCTTCAGCAGAAGTTTATATTTTTATTTGCGCCAAGAACAGGGCGTTGAAACAGCTTAAAAAACAAAACCTTTACGCGGATGTGCTGTCGGGTTTGCATGATATAGAATGCATTATGGTGAGAACCCCGCACGATATTTTAATAAGTTCAGAAATGCACCGGCGCATCAACGAGGCTATCCGCACGTTGCCTCCCCAGTGCAAGCTTATTTTTACGCTTGTAAAAGAAAACAGTCTCAAGTACCGTGAAGTGGCCAAGCTGCTGGGGCTCTCTGAAAAAACAGTAGAGAACCAGATGGGGATTGCCCTAAAAAAGCTAAGCCACGCTATTCCCCTGTCTTTCAGCCTGTAA
PROTEIN sequence
Length: 187
MQAEKPNIRDLFFRMASSDDETALWELHTEYFPRLFRFAFAFIGNKETTEEVVNDTFLDLWQKRHLLHNVSSAEVYIFICAKNRALKQLKKQNLYADVLSGLHDIECIMVRTPHDILISSEMHRRINEAIRTLPPQCKLIFTLVKENSLKYREVAKLLGLSEKTVENQMGIALKKLSHAIPLSFSL*