ggKbase home page

SCN18_13_7_16_R1_B_scaffold_2629_2

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(642..1523)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 294.0
  • Bit_score: 386
  • Evalue 2.00e-104
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCS6_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 294.0
  • Bit_score: 386
  • Evalue 1.40e-104
Ribosomal RNA small subunit methyltransferase H similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 294.0
  • Bit_score: 386
  • Evalue 4.00e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 882
TTGCTCAGCGAAACGATTGACGCCCTGCAGGTAAAAGCAGGGGGAACTTATGTGGATTGCACTTTTGGCGGTGGCGGTCATAGCAAAGCCATACTCAATATGCTGGATGCTGATGGCAGGCTGCTGGTGTTTGACCAGGATGCTGACGCCAGACAGAATGTGCCTGACGACCCGCGCATTACTTTCCTCCAATACAACTTCCGTCATGTGCAGCGCATACTGCGACTGCACAGGATAGAGACGGTAGATGGCATATTAGCCGATCTTGGCGTGTCGAGCCACCAGTTTGATGAAGCCGGACGCGGGTTCTCCACCCGGTTCAATGATGCATTGCTTGATATGCGGATGGACCAGCGGCAGGAGCTCACCGCCGCCGGTATTATAGAAACCTATACCGAGCAGGCGCTGCACAAGCTGTTTGAGCAATATGGCGAAGTGACCAATGCAAAAACGCTGGCGAAAACCATCGTGCAATACCGTCAGCTTACCCCCGTCAAAACAGTAAATGAGCTCAGGGCGGCAGCAGCTTCCGTGGTGAAAGGTAATCCCAACAAATATTTTGCCCAGGTATTCCAGGCGCTGCGCATGGCGGTAAACGATGAAGCAGGCGCATTGCAGGAACTGCTCCGGCAACTTCCCTCCCTCCTGAAGAAAGGCGGCCGCGCTGCCATCATCACTTTTCACAGTATTGAAGACAGGCTGGTAAAAAACTTTTTCCGCAGCGGAGGGTTTGACGAAGTGGCGCCGGATGCTCTTTTTGGCACACGCCCTGAGAGCCCGTTCGTGCTGGTCACCAAAAAACCAATTATCCCTTCCGCTGCCGAAATACGGCAAAACCCCAGGAGCCGGAGCGCTAAGCTGCGGGTGGCGGAGAGAAGATGA
PROTEIN sequence
Length: 294
LLSETIDALQVKAGGTYVDCTFGGGGHSKAILNMLDADGRLLVFDQDADARQNVPDDPRITFLQYNFRHVQRILRLHRIETVDGILADLGVSSHQFDEAGRGFSTRFNDALLDMRMDQRQELTAAGIIETYTEQALHKLFEQYGEVTNAKTLAKTIVQYRQLTPVKTVNELRAAAASVVKGNPNKYFAQVFQALRMAVNDEAGALQELLRQLPSLLKKGGRAAIITFHSIEDRLVKNFFRSGGFDEVAPDALFGTRPESPFVLVTKKPIIPSAAEIRQNPRSRSAKLRVAERR*