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SCN18_13_7_16_R1_B_scaffold_5040_4

Organism: SCN18_13_7_16_R1_B_Terrimonas_44_11

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(4076..4888)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003676C36 similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 267.0
  • Bit_score: 308
  • Evalue 5.90e-81
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 271.0
  • Bit_score: 161
  • Evalue 1.90e-37
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV99545.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.5
  • Coverage: 271.0
  • Bit_score: 161
  • Evalue 9.50e-37

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Taxonomy

SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 813
CGCATCTGCGGCAACAGCCCGGCAGCCAGGGATGCAGTACAGGATACCTTTGTAACAGCATATCTCAAACTGCAACAACTGAAAGATACGGCTGCATTTCCGGGTTGGTTAAAGACCATTCTTATACGATTTTGCCAGCGGTATAAGCAACAGCAACCTTATAATGATTTTAATGACCTGTCCTTGCTGGAAAACAGCAGGTTTTGCGAAAATGAAGTAAGTAAAAGAATGGACTGGTATGAGCGGCAATCAAAAATATATGAGAGCCTTTCCTGCCTGTCGGATACCCTGCAAAGTGTTTTACTGCTCCGCTATTTTTCCGGTTGGTCTTCTTACGAAGCCATAGCTATCCTGCTTTGTATCCCTGTGGGCACAGTGCGTAGCCGCCTTAACCAGGCAAAGCAAAAGCTTGCGGAACAATGGGCGAAAAGCAATGATGATAATGATGTCGCTTTCAGGAGAGCAGGTGAATGGAACAGCCTGTACAATGATTATTTTGGCAATATTTATACTTCCCTGCAGCGCCGTGAAAAGCTGATCGCACATCTGGATAAAAACCTGCACCTTGTGTTCACGAGCGGCAAGACCGCTATGGGGCGCTCTCTGGTGCAGCAGATGATAGAAGACGACATTATGTATGGGAACAGCTTTGCCGGGCTGGAGGTTGCCAGCAGCGGTAATATTTCCTTGATTGAATGTCAAAATATTAATCCTGACGAATATCCTGAGCGTTGCCCTGAGCGCACCGTATTTGTATTATACCGCTCAGGTAATACAGTTACTCAAATGAACCTTCACCATACAGCAAGGTAA
PROTEIN sequence
Length: 271
RICGNSPAARDAVQDTFVTAYLKLQQLKDTAAFPGWLKTILIRFCQRYKQQQPYNDFNDLSLLENSRFCENEVSKRMDWYERQSKIYESLSCLSDTLQSVLLLRYFSGWSSYEAIAILLCIPVGTVRSRLNQAKQKLAEQWAKSNDDNDVAFRRAGEWNSLYNDYFGNIYTSLQRREKLIAHLDKNLHLVFTSGKTAMGRSLVQQMIEDDIMYGNSFAGLEVASSGNISLIECQNINPDEYPERCPERTVFVLYRSGNTVTQMNLHHTAR*