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SCN18_13_7_16_R1_B_scaffold_116_18

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(19810..21015)

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N9H0_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 401.0
  • Bit_score: 382
  • Evalue 3.60e-103
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 401.0
  • Bit_score: 382
  • Evalue 1.00e-103
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:CAE27020.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 401.0
  • Bit_score: 382
  • Evalue 5.10e-103

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGGACGGATTGTTCGCAGATCTTCTCGTCATCGATTGCGCCAGCTTCATTGCCGGCCCCGCGGCGGCCACCATGCTGGCCGATTTCGGCGCCCGCGTGATAAAGATCGAACCGCCGGTCACGGGCGACAGTTACCGCCAGCTCAAACATCTGCCCAGCATGCCGCCATCGGAACACGATTATTCCTGGCTGCTCGACAACCGGAACAAGGAAAGTCTGGCGCTGGATCTGAAACAGGCGCCCGCGCGCGCGATCTTCGAAACGCTTCTGAAAAGGTGCGATGTCTTCATCACCAATTATCCCGGTCCAGTGCGGGAAAAGCTGCGCTTGCGCGCCGACGATCTCTTGCCGCTCAATCCGCGGCTGATCTATGCCTCCATCACCCCTTATGGCGAGTCGGGGCCGGAGAAGGATCGCACCGGTTACGATGCCACGGCGTGGTGGGCGCGCTCCGGCCTGATGGATCATGTCCGCGCCTCCCCCGATGCGGCGCCGGGCCTTTCGGTGCCGGGCATGGGCGATCACCCGACCGCCGCCACCTTGTTTGCAGGCATTGCCGCCGCCCTCTACCGGCGGGAGAAGACGGGCAAGGGCGGTCACGTTTCCACATCGCTGCTCGCCAACGGGTTGTGGTCCAATGCCGTGCTGGTACAGGCCGCGCTTTGCGGCGCCGATCTTGGCATCCGCCGCGGCCGTGGCGAAAGAAGCGCACTGACAGAGCTTTATTGTTGCAAGGACGGGCGCTGGTTCATGCTCGTCATCATCAACGATACGCGCGATTGGCCGCGCCTGCTCGCATGTCTCGGCAAAGGCGAATGGGCGTCCGATCCCCGCTTTGCGACGGCGGATGCGCGCAAGGCCAACGCCGCCTATCTGGTCGCGCTGCTGGAAGATGTGTTCGCGGGCGATGATTGGGCCCATTGGCAGGTCTGTTTCGAAGCTGCCGCTATTCCCGTCGGTGCGATTTCGCGCACCACAGACCACATCGTGGATGGGCAGATTGCCGCCAATGACTTCTTTCGCGACATTGCGGGCGTTGCCGGGGTGAAAACCATTGACAATCCGGTGCAGATTGCGGGCTGCGCGAAGGTGCCGCCGCGCAAGGCGCCCGAGATCGGTCAGCATACAGGCGCGATCCTGCGGGAGTTGGGGTTGGCGCAAGCCGAGATTGCGGCGCTGGCCGAATGCGGTGCCGCCGGTCTTTGA
PROTEIN sequence
Length: 402
MDGLFADLLVIDCASFIAGPAAATMLADFGARVIKIEPPVTGDSYRQLKHLPSMPPSEHDYSWLLDNRNKESLALDLKQAPARAIFETLLKRCDVFITNYPGPVREKLRLRADDLLPLNPRLIYASITPYGESGPEKDRTGYDATAWWARSGLMDHVRASPDAAPGLSVPGMGDHPTAATLFAGIAAALYRREKTGKGGHVSTSLLANGLWSNAVLVQAALCGADLGIRRGRGERSALTELYCCKDGRWFMLVIINDTRDWPRLLACLGKGEWASDPRFATADARKANAAYLVALLEDVFAGDDWAHWQVCFEAAAIPVGAISRTTDHIVDGQIAANDFFRDIAGVAGVKTIDNPVQIAGCAKVPPRKAPEIGQHTGAILRELGLAQAEIAALAECGAAGL*