ggKbase home page

SCN18_13_7_16_R1_B_scaffold_116_29

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 33948..35495

Top 3 Functional Annotations

Value Algorithm Source
Multidrug efflux pump, MF Superfamily protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0P6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 484.0
  • Bit_score: 537
  • Evalue 8.70e-150
Multidrug efflux pump, MF Superfamily protein {ECO:0000313|EMBL:EDP62061.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 484.0
  • Bit_score: 537
  • Evalue 1.20e-149
multidrug resistance protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 515.0
  • Bit_score: 501
  • Evalue 2.00e-139

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1548
ATGACGGATGCGAAAGCGGGGCCAGAGGCTATACCGCCCGGCGACTGGATCGGGTTTCTGGCCATGTGCATCGGCATGTTCATGGCCATTCTGGATATCCAGATCGTGGCCAGTTCGCTGCCGCGCATCGGTTCAGCGCTTGGCATCGGCGAAAACGGGCTGAGCTGGATTCAGACCGCCTATCTGATCCCGGAAATCATCGCCATTCCGCTGACCGGATTTCTGACCCGCGCGCTGTCGCTGCGCTGGCTGTTCGCCGGGTCGACGCTTGCGTTTGCGCTTGCGAGCCTTGCCTGCGCGCTCAGCAGCAATTTCGGCGAATTGATCCTGTTTCGTGCCCTGCAAGGATTTTCGGGCGGTGCGCTGATCCCGGCCGTGTTCACATCGGTGTTCGTGATTTTTCCGCGCCGGGCGCACGCGATGGCAACCGTTGTGGCCGGCAGCTTTGCGATGATCGCGCCGACCCTTGGGCCCATTCTGGGCGGCTATCTGACCGAAACCTATTCCTGGCATGTGATCTTTCTGATCAATGTGGTGCCGGGGATCGTGGTGGCGCTGTTCGTGATCCGCTTTATCCGGGCGGACCGGCTGAACCTTTCCCTGCTCAAATCCATCGACTACAGCACCGTGGTTCTGGCGGCGCTGTTCCTGTCAAGCCTGATGCTGCTGCTGAAGGAGGGGCCGAAACAATCCTGGTACGGCAGCGATATTCTGCTGCTGGCGCTGTTTTCGATCATCTCGCTTGCGATCACGATCCAGCAATGTCTGACCCGCCCGCACCCGTTCGTGCATTTGCGGAAATTCGCCGACCCGTCATTCCGCACCGGCGCGCTGTTGAGTTTTACAATCGGCATCGGGCTTTACGGCGCCACCTATCTGATGCCGGTGTTCCTTGGCTATGCCGGGCGGCAGAACCCGCTTCAGATCGGCGAAATCATGATCGTGGCGGGGATTGCGCAACTGATTGCCGCGCCGGTGGCGGCATTGGTGGAACCGCGGCTGTCACCGAAATGGCTGGGGCTGTTCGGGTTCGCACTGTTCGGCGCAGGGTTGATCGCCAACGGCTTCATGACGCCGCGCACACTTTATGACGGGCTGTTCTGGCCGCAGGTTCTGCGCGGTGTGGCGGTGATGGCATGCATCCTGCCGGCAACGCGGTTTGCACTGGATCATTGGCCGGAGGCCGAAGTGGCGGACGCCAGTGCATTGTTCAACCTGATGCGCAACATGGGCGGGGCCATCGGCATCGCGCTGGTCGATACGGTGCTGCAGGAACGCGCGCCGGTGCATGTGGAGAGGCTGGTCGAACGGTTGCAGGCAGGCGAACGTACCGCGGCCCAATTCGCCGGCCTGCCGCTTGAGCGTTTTACCGGCCATCCGCTCGGCCCGATTGACGCCTTCACCCGGGCACTGGTGAAACCATTGGTGGAACGCGCCGCCCTGACCCTGGCCAGCAACGAAGCCTGGCTGCTGGCGGGCGCAATTTTCGTGGCCGCAACGCTGTTGTTGTTGCTGGCGCCGCGCAGTGTGGGGCGCACGGAGAATTAG
PROTEIN sequence
Length: 516
MTDAKAGPEAIPPGDWIGFLAMCIGMFMAILDIQIVASSLPRIGSALGIGENGLSWIQTAYLIPEIIAIPLTGFLTRALSLRWLFAGSTLAFALASLACALSSNFGELILFRALQGFSGGALIPAVFTSVFVIFPRRAHAMATVVAGSFAMIAPTLGPILGGYLTETYSWHVIFLINVVPGIVVALFVIRFIRADRLNLSLLKSIDYSTVVLAALFLSSLMLLLKEGPKQSWYGSDILLLALFSIISLAITIQQCLTRPHPFVHLRKFADPSFRTGALLSFTIGIGLYGATYLMPVFLGYAGRQNPLQIGEIMIVAGIAQLIAAPVAALVEPRLSPKWLGLFGFALFGAGLIANGFMTPRTLYDGLFWPQVLRGVAVMACILPATRFALDHWPEAEVADASALFNLMRNMGGAIGIALVDTVLQERAPVHVERLVERLQAGERTAAQFAGLPLERFTGHPLGPIDAFTRALVKPLVERAALTLASNEAWLLAGAIFVAATLLLLLAPRSVGRTEN*