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SCN18_13_7_16_R1_B_scaffold_538_15

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(16657..17793)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 376.0
  • Bit_score: 589
  • Evalue 3.40e-165
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTY2_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 376.0
  • Bit_score: 589
  • Evalue 2.40e-165
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 376.0
  • Bit_score: 589
  • Evalue 6.80e-166

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1137
ATGAGCATTCGCGCGTATCGCGATATTCACAGGCGCAAATCCCGTCAGATTCATGTGGGGCCCGTCGCGGTTGGTGGTGATGCACCGATCACGGTCCAGACCATGACCAACACGGTGACGTCGGATGTGCGCGGCACGATCGACCAGATCCGCCGCGTGGAAGAGGCGGGATGCGACATCGTCCGTGTCTCCTGCCCGGATGAAGACGCCACCAAGGCGATGAAGCCGATCTGCAGGGCGGCGAAAATCCCGATCGTTGCCGACATTCACTTTCACTACAAGCGCGCGATCGAGGCGGCGGAGGCGGGCGCGGCCTGTCTGCGTATCAATCCCGGTAATATCGGGTCTGCTGCGCGGGTGAAGGAAGTGGTCAAGGCCGCGAAGGATCACGGCTGTTCGATGCGCATCGGCGTCAATGCCGGATCGCTCGAAAAGGAATTGCTTGAGCGTTATGGCGAGCCTTGCCCGGAAGCGATGGTCGAAAGCGCGCTCAACCATGCGAAGATTCTCGAAGACAACGACTTCACCGAATTCAAGATCAGCGTGAAGGCATCCGATCCGTTCCTGGCGGTTGCGGCCTATCAGGGGCTGGCGGAGGCGTGCGATTATCCGCTGCATCTGGGCGTGACCGAGGCGGGTGGCATGATCCCCGGTACGGTGAAATCCTCCATCGGCATGGGCATGCTGTTGTGGTCCGGTATCGGCGACACGATCCGGGTTTCACTTTCCGCCGAACCGGAAGAAGAAGTGCGGGTCGGCTTCGATATTCTGAAGGCGCTCAACCTGCGCCATCGTGGTGTGAACATCGTTTCGTGCCCATCCTGTGCGCGGCAGGGCTTCAAGGTGATCGAAACGGTACGCGCGCTGGAAGACCGGCTGAAGCACATTTCAACGCCGATGTCGCTTTCGATCATTGGCTGTGTGGTCAACGGCCCGGGCGAGGCACGTGAAACCGACCTCGGGTTCACTGGTGGTGGCGCGGGCAAGGGCCATGGGCAAATCTATCTCAACGGCAAGCCGTCCTATCGGCTGGACAATGAGAATTTGATCGATCACGTCGTCGAACTTTGCGAAAAGAAAGCGGCGGAGATCGAAGCGGCCCGTGGCGACGCACCTGCGCTTGAGCCGGCGCAGTAG
PROTEIN sequence
Length: 379
MSIRAYRDIHRRKSRQIHVGPVAVGGDAPITVQTMTNTVTSDVRGTIDQIRRVEEAGCDIVRVSCPDEDATKAMKPICRAAKIPIVADIHFHYKRAIEAAEAGAACLRINPGNIGSAARVKEVVKAAKDHGCSMRIGVNAGSLEKELLERYGEPCPEAMVESALNHAKILEDNDFTEFKISVKASDPFLAVAAYQGLAEACDYPLHLGVTEAGGMIPGTVKSSIGMGMLLWSGIGDTIRVSLSAEPEEEVRVGFDILKALNLRHRGVNIVSCPSCARQGFKVIETVRALEDRLKHISTPMSLSIIGCVVNGPGEARETDLGFTGGGAGKGHGQIYLNGKPSYRLDNENLIDHVVELCEKKAAEIEAARGDAPALEPAQ*