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SCN18_13_7_16_R1_B_scaffold_540_5

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 4528..4968

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease H {ECO:0000255|HAMAP-Rule:MF_00042}; Short=RNase H {ECO:0000255|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00042};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 143.0
  • Bit_score: 211
  • Evalue 7.40e-52
RNaseH ribonuclease n=1 Tax=Methylopila sp. M107 RepID=UPI00037CE438 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 138.0
  • Bit_score: 212
  • Evalue 1.80e-52
ribonuclease H similarity KEGG
DB: KEGG
  • Identity: 67.1
  • Coverage: 143.0
  • Bit_score: 211
  • Evalue 1.50e-52

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
TTGAGTTTTCTGCGTGTCGATATTTTCACCGACGGTGCCTGTTCAGGAAATCCGGGACCCGGCGGTTGGGGCGCGATTTTACGCGCGGGCGCCCATGAGCGCGAAATTTCTGGCAGCGAAAATCCGACCACCAACAACCGGATGGAAATCCTGGCGGCCATCAGGGGTCTTCAGGCATTGAAGCGGCCATCGGATGTCACGATTCATACCGATTCCCGCTACCTTCTGGATGGAGCGACGAAATGGCTCGCCCGCTGGAAGGCCAATGGCTGGCGCACGGCAGATAAAAAACCGGTCAAGAACGAAGACCTTTGGCGGCTGCTGGAAACCGAAATGGAGAAGCACGCTATGGCATGGCAATGGGTCAAAGGCCATTCCGATCATCCGGAGAATGAGCGCGCGGACGCCCTAGCCCGCGCGGCCATTTCCGCAAATCGATAA
PROTEIN sequence
Length: 147
LSFLRVDIFTDGACSGNPGPGGWGAILRAGAHEREISGSENPTTNNRMEILAAIRGLQALKRPSDVTIHTDSRYLLDGATKWLARWKANGWRTADKKPVKNEDLWRLLETEMEKHAMAWQWVKGHSDHPENERADALARAAISANR*