ggKbase home page

SCN18_13_7_16_R1_B_scaffold_566_12

Organism: SCN18_13_7_16_R1_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_16

near complete RP 49 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 13880..15442

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 514.0
  • Bit_score: 719
  • Evalue 2.30e-204
2-isopropylmalate synthase n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DHN0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 522.0
  • Bit_score: 716
  • Evalue 1.10e-203
2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 512.0
  • Bit_score: 690
  • Evalue 2.30e-196

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
ATGAGTACGAATTCTGAGGGTCACGAGCGAGTTCGCATCTTCGACACCACACTGCGCGATGGAGAACAATCTCCCGGCGCGGCGATGACACATCAGGAAAAGATCGAAGTTGCCGAACTGCTCGATGCCATGGGTGTCGACATCATCGAGGCGGGTTTCCCGATTTCCTCGGTGGGCGACTTTGAAGCGGTCAATGAAATTGCCAAGCGCACGAAGAACGCGGTGATCTGCGGCCTGTCGCGCGCGGGCTTCAAGGATATCGACCGCGCGGGCGAGGCGCTGAAGCCTGCCAGGCGTTTCCGCATTCACACCTTCATCTCCACCAGCCCCGTGCATATGAAGCACAAGCTGCAGATGGGACCCAATGCGGTGCTGGATGCGGTGGGCGCATCGGTGGTCAGGGCACGCAATTTCACCGACGACGTGCAGTGGAGCGCGGAAGACGCAACGCGGACGGAGGCCGATTTCCTCTGCCGCTGTGTGGAACTGGCGATCCGTTCCGGCGCCACCACGATCAATATTCCCGATACCGTGGGCTATACCACGCCGCAGGAATATGTGGCGCTGATCCAGATGCTGCGCAATCGCGTGCCGGATGCGGACAAGGTGATCTTTTCCACCCATTGCCACAACGATCTGGGCCTGGCCGTGGCCAATTCGCTGGCCGGCATCATCGGCGGTGCGCGGCAGGTGGAATGCACCGTCAACGGCATCGGCGAGCGGGCGGGCAACGCCGCGCTGGAAGAAATCGTGATGGCGCTCAAGGTGCGCAAGGATGCGATGGCGTTCACCACCGGCATCGATACGCGGATGCTGGCGCGCGCCTCCAAACTCGTCTCCAACGTCACCGGCTTTCCGGTGCAGTACAACAAGGCCATCGTCGGCAAGAATGCCTTCAGCCATGAATCCGGCATCCATCAGGACGGCATGCTGAAGAATGTCGAGACCTACGAGATCATGCGCCCGGAAGATGTGGGGGTGAAGGAAACCTCGCTGGTGCTGGGCAAGCTGTCGGGCCGGCACGCTTTCCGCGAGAAGCTGGCGAGCCTCGGCTACGACCTGAGCGATGAAGCGTTCGCGGAAACCTTCCGCCGCTTCAAGGCGCTGGCCGACCGCAAGAAGCATGTCTTCGATGAGGACATTGTCGCCCTTGTCGATGACGGTGTGATCCGCGGCAAGGATACGATTTCGGTCCAGTCGCTGAGGATCGAGACCGGAATCGGTGTGGCACCTGCGGCCGAGATGACACTTTCGGTCGATGGTGAAATCCGCAGCGGAAAAACCACCGGCGATGGCGCGGTGGATGCGGTGTTCGCCGTGATCCGCACGCTTTATCCCCATCCGGCCCATCTGCAACTGTTTCAGGTGCAGGCGGTGACGGAAGGGACCGATGCACAGGCGAATGTCAGTGTGCGGCTGGAAGAAAACGGCCGCACCGTGACGGGGCGCGCCGCCGATACCGATACGCTGGTGGCCGCGGCATACGCCTATGTGAATGCCTTAAACAAACTGTTGGTGAAACGTACGAAGCAGGCGCCGGAAGCATTGACGGTCGCGCGATAG
PROTEIN sequence
Length: 521
MSTNSEGHERVRIFDTTLRDGEQSPGAAMTHQEKIEVAELLDAMGVDIIEAGFPISSVGDFEAVNEIAKRTKNAVICGLSRAGFKDIDRAGEALKPARRFRIHTFISTSPVHMKHKLQMGPNAVLDAVGASVVRARNFTDDVQWSAEDATRTEADFLCRCVELAIRSGATTINIPDTVGYTTPQEYVALIQMLRNRVPDADKVIFSTHCHNDLGLAVANSLAGIIGGARQVECTVNGIGERAGNAALEEIVMALKVRKDAMAFTTGIDTRMLARASKLVSNVTGFPVQYNKAIVGKNAFSHESGIHQDGMLKNVETYEIMRPEDVGVKETSLVLGKLSGRHAFREKLASLGYDLSDEAFAETFRRFKALADRKKHVFDEDIVALVDDGVIRGKDTISVQSLRIETGIGVAPAAEMTLSVDGEIRSGKTTGDGAVDAVFAVIRTLYPHPAHLQLFQVQAVTEGTDAQANVSVRLEENGRTVTGRAADTDTLVAAAYAYVNALNKLLVKRTKQAPEALTVAR*